Adding metadata

9 files changed, 0 insertions, 739 deletions

diff --git a/sci-physics/yoda/Manifest b/sci-physics/yoda/Manifest
deleted file mode 100644
index 04739894f225..000000000000
--- a/sci-physics/yoda/Manifest
+++ /dev/null
@@ -1,3 +0,0 @@
-DIST YODA-1.9.10.tar.bz2 1278729 BLAKE2B f6ae9b579d79b6be62e9644e327f0b449882c0f1a0efaac09ac97eae90a2ced10bf2b13447d75390552b3e4d8c128e7a33184bf8b2d308236f828e611df6d7a4 SHA512 54a455a1b2772ea3201477d4dddcf0c92c85bfee8825d8726d62331ebacb37fc8d1f6e02cdfe592722f2a747a46786d2bdb3c36cc982794a30b25e718d32e998
-DIST YODA-2.1.2.tar.bz2 1022526 BLAKE2B 75f13b04b66b632c66e2442f8bf8ccdb23ce15eec88e9b26a7924d0dc0e4ca80be0eadaf032aeec489a48b2b21beb9656d4f8fdf03ece02dca81133e23850d8d SHA512 39c21f97333c98744006d39903c3cdfd617a8ab6fc253f08412898e8998678963912bd6c6fb0b7bb58e162f48658606d9cdb891f12bc64ff730b158292ff9a85
-DIST YODA-2.1.3.tar.bz2 1033195 BLAKE2B 14065f1bc9a149206e07b80551740b59d8701106cb787ef5c1e1846590d819fd544fe5949859018f3c36daecebdb255308904091eb33b82eb6796a0b43c770f2 SHA512 8424746078434f0fedc405f35d89638bdf01a1f1e49dfed8a8da98682f3d9561356d9eea7cdc22898a861bc980c000e75cc4e63ed9e15670e53b2f15760cf813
diff --git a/sci-physics/yoda/files/yoda-1.9.9-configure.patch b/sci-physics/yoda/files/yoda-1.9.9-configure.patch
deleted file mode 100644
index 47872f64097a..000000000000
--- a/sci-physics/yoda/files/yoda-1.9.9-configure.patch
+++ /dev/null
@@ -1,56 +0,0 @@
-From a9267acfaadf93cd4fbe6d5a91e766bfb3bf154a Mon Sep 17 00:00:00 2001
-From: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
-Date: Fri, 15 Mar 2024 20:36:32 +0000
-Subject: [PATCH 1/2] Fix configure failure for uncommon shells
-
----
- configure.ac | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/configure.ac b/configure.ac
-index 86de6b35..e9db8ee7 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -131,11 +131,11 @@ if test x$enable_pyext = xyes; then
-     enable_pyext=no
-   fi
- fi
--AM_CONDITIONAL(ENABLE_PYEXT, [test x$enable_pyext == xyes])
-+AM_CONDITIONAL(ENABLE_PYEXT, [test x$enable_pyext = xyes])
- 
- 
- ## Cython checks
--if test x$enable_pyext == xyes; then
-+if test x$enable_pyext = xyes; then
-   AM_CHECK_CYTHON([0.24], [:], [:])
-   if test x$CYTHON_FOUND = xyes; then
-     AC_PATH_PROGS(CYTHON, [$CYTHON cython-$PYTHON_VERSION cython$PYTHON_VERSION cython-$PYTHON_MAJOR_VERSION cython$PYTHON_MAJOR_VERSION cython])
--- 
-GitLab
-
-
-From 62f321a54d83a3937d5061759ca04b97aa8e2616 Mon Sep 17 00:00:00 2001
-From: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
-Date: Fri, 15 Mar 2024 20:41:19 +0000
-Subject: [PATCH 2/2] Update configure.ac
-
----
- configure.ac | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/configure.ac b/configure.ac
-index e9db8ee7..6a8a34cb 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -194,7 +194,7 @@ AC_CONFIG_FILES([yodaenv.sh yoda.pc])
- 
- AC_OUTPUT
- 
--if test x$enable_pyext == xyes; then
-+if test x$enable_pyext = xyes; then
-    cat <<EOF
- 
- ************************************************************
--- 
-GitLab
-
diff --git a/sci-physics/yoda/files/yoda-2.1.2-testbinestimate.patch b/sci-physics/yoda/files/yoda-2.1.2-testbinestimate.patch
deleted file mode 100644
index 9e6f1cbb103b..000000000000
--- a/sci-physics/yoda/files/yoda-2.1.2-testbinestimate.patch
+++ /dev/null
@@ -1,30 +0,0 @@
-https://gitlab.com/hepcedar/yoda/-/merge_requests/387
-From 12c3786635875ebf3e7c969248654191736b660a Mon Sep 17 00:00:00 2001
-From: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
-Date: Sat, 20 Dec 2025 19:46:34 +0100
-Subject: [PATCH] fix rounding uncertainty on bin edge in tests
-
-Closes: https://gitlab.com/hepcedar/yoda/-/issues/151
----
- tests/TestBinEstimators.cc | 5 ++++-
- 1 file changed, 4 insertions(+), 1 deletion(-)
-
-diff --git a/tests/TestBinEstimators.cc b/tests/TestBinEstimators.cc
-index 14fb9f5e..e89cccf3 100644
---- a/tests/TestBinEstimators.cc
-+++ b/tests/TestBinEstimators.cc
-@@ -40,7 +40,10 @@ auto testLogEst() {
-                         est2.estindex(  0.) == 0 &&
-                         est2.estindex(  1.) == 1 &&
-                         est2.estindex(  5.) == 1 &&
--                        est2.estindex( 10.) == 2 &&
-+                        est2.estindex( 9.9) == 1 &&
-+                        // amd64 vs x86 rounding can give different results here
-+                        (est2.estindex(10.) == 1 || est2.estindex( 10.) == 2) &&
-+                        est2.estindex(10.1) == 2 &&
-                         est2.estindex(100.) == 2);
- }
- 
--- 
-GitLab
-
diff --git a/sci-physics/yoda/files/yoda-2.1.3-stdvector.patch b/sci-physics/yoda/files/yoda-2.1.3-stdvector.patch
deleted file mode 100644
index 5dd1bc78aae8..000000000000
--- a/sci-physics/yoda/files/yoda-2.1.3-stdvector.patch
+++ /dev/null
@@ -1,173 +0,0 @@
-From 22c3cfbd04bdd7ef31db0800f9fa8d5a7f637e2e Mon Sep 17 00:00:00 2001
-From: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
-Date: Mon, 25 May 2026 12:55:59 +0200
-Subject: [PATCH 1/2] Use namespace std and remove std:: prefixes
-
----
- tests/TestBinnedStorage.cc | 35 ++++++++++++++++++-----------------
- 1 file changed, 18 insertions(+), 17 deletions(-)
-
-diff --git a/tests/TestBinnedStorage.cc b/tests/TestBinnedStorage.cc
-index 4ce8a18c..b61a078a 100644
---- a/tests/TestBinnedStorage.cc
-+++ b/tests/TestBinnedStorage.cc
-@@ -9,18 +9,19 @@
- #include <vector>
- 
- using namespace YODA;
-+using namespace std;
- 
--using DStrAxis = Axis<std::string>;
-+using DStrAxis = Axis<string>;
- using CDblAxis = Axis<double>;
- using DIntAxis = Axis<int>;
- 
- using BinningT = Binning<DStrAxis, CDblAxis, DIntAxis>;
- 
- template <typename T>
--using StorageT = BinnedStorage<T, std::string, double, int>;
-+using StorageT = BinnedStorage<T, string, double, int>;
- 
- template <size_t N, typename T>
--using FillableT = FillableStorage<N, T, std::string, double, int>;
-+using FillableT = FillableStorage<N, T, string, double, int>;
- 
- auto constructors() {
-   BinningT binning({"test1", "test2"}, {1., 2., 3., 4.}, {1, 2, 3, 4, 5});
-@@ -63,7 +64,7 @@ auto adapterConstructors() {
-   auto binStorage2 = FillableT<3, double>(binning, adapter1);
-   auto binStorage3 = FillableT<3, TestClass>(binning, adapter2);
- 
--  binStorage3.fill({"test1", 1.5, 1}, std::make_index_sequence<3>());
-+  binStorage3.fill({"test1", 1.5, 1}, make_index_sequence<3>());
- 
-   FillableT<3, TestClass>::BinType& bin = binStorage3.binAt({"test1", 1.5, 1});
- 
-@@ -83,10 +84,10 @@ auto set() {
- }
- 
- auto binsVectorWrapper() {
--  auto binning = std::make_shared<BinningT>(
-+  auto binning = make_shared<BinningT>(
-     BinningT({"test1", "test2"}, {1., 2., 3., 4.}, {1, 2, 3, 4, 5}));
-   using BinT = Bin<3, int, BinningT>;
--  std::vector<BinT> bins;
-+  vector<BinT> bins;
- 
-   bins.reserve(100);
-   for(size_t i = 0; i < 100; i++){
-@@ -94,9 +95,9 @@ auto binsVectorWrapper() {
-   }
- 
-   /// @note Must be sorted.
--  std::vector<size_t> hiddenBins = {0, 9, 15, 87};
-+  vector<size_t> hiddenBins = {0, 9, 15, 87};
- 
--  auto vecWrapper = BinsVecWrapper<std::vector<BinT>>(bins, hiddenBins);
-+  auto vecWrapper = BinsVecWrapper<vector<BinT>>(bins, hiddenBins);
- 
-   for (auto& bin : vecWrapper) {
-     for (auto& i : hiddenBins) {
-@@ -178,8 +179,8 @@ auto dbnAdapter() {
- 
-   auto binStorage = FillableT<3, Dbn<3>>(binning);
- 
--  binStorage.fill({"test1", 1.4, 1}, std::make_index_sequence<3>(), 2.0, 1.0);
--  binStorage.fill({"test1", 1.6, 1}, std::make_index_sequence<3>(), 2.0, 1.0);
-+  binStorage.fill({"test1", 1.4, 1}, make_index_sequence<3>(), 2.0, 1.0);
-+  binStorage.fill({"test1", 1.6, 1}, make_index_sequence<3>(), 2.0, 1.0);
- 
-   auto& bin = binStorage.binAt({"test1", 1.4, 1});
- 
-@@ -190,7 +191,7 @@ auto shape() {
-   vector<string> sedges{"A", "B", "C"};
-   vector<double> dedges{1.,2.,3.,4.};
-   vector<int> iedges{1,2,3,4,5,6,7};
--  using BinStorageT = BinnedStorage<double, std::string, double, int>;
-+  using BinStorageT = BinnedStorage<double, string, double, int>;
-   BinStorageT storage(sedges, dedges, iedges);
-   const bool res1 = storage.shape() == vector<size_t>{3, 3, 7};
-   const bool res2 = storage.shape(true) == vector<size_t>{4, 5, 8};
-@@ -198,10 +199,10 @@ auto shape() {
- }
- 
- auto getBins() {
--  using BinStorageT = BinnedStorage<double, std::string, double>;
-+  using BinStorageT = BinnedStorage<double, string, double>;
-   BinStorageT binnedStorage1({"test1", "test2"}, { 1.0, 2.0, 3.0});
- 
--  std::vector<size_t> overflowIndices = {0, 1, 2, 3, 6, 9, 10, 11};
-+  vector<size_t> overflowIndices = {0, 1, 2, 3, 6, 9, 10, 11};
- 
-   auto binsVec1 = binnedStorage1.bins();
- 
-@@ -213,11 +214,11 @@ auto getBins() {
- 
-   /// @note Double curly braces to construct temporary axes, because
-   /// there is no constructor defined to work with arguments
--  /// of std::initializer_list<T> and std::initializer_list<std::initializer_list<T>>
-+  /// of initializer_list<T> and initializer_list<initializer_list<T>>
-   /// type. Intermediate axis is created.
-   /*BinStorageT binnedStorage2({{"test1", "test2"}}, {{{1., 2.}, {3., 4.}}});
- 
--  std::vector<size_t> hiddenBinIndices = {4, 5}; /// {0,1} + 2*2
-+  vector<size_t> hiddenBinIndices = {4, 5}; /// {0,1} + 2*2
- 
-   auto binsVec2 = binnedStorage2.bins(true);
- 
-@@ -231,7 +232,7 @@ auto getBins() {
- }
- 
- auto mergeBins() {
--  using BinStorageT = BinnedStorage<double, std::string, double>;
-+  using BinStorageT = BinnedStorage<double, string, double>;
-   BinStorageT binnedStorage1({"test1", "test2"}, {1., 2., 3.});
-   BinStorageT binnedStorage2({"test1", "test2"}, {1., 2., 3., 4., 5., 6.});
- 
-@@ -248,7 +249,7 @@ auto mergeBins() {
- }
- 
- auto binnedStorageOperators() {
--  using BinStorageT = BinnedStorage<double, std::string, double>;
-+  using BinStorageT = BinnedStorage<double, string, double>;
-   BinStorageT binnedStorage1({"test1", "test2"}, {1., 2., 3.});
-   BinStorageT binnedStorage2({"test1", "test2"}, {1., 2., 3., 4., 5., 6.});
- 
--- 
-GitLab
-
-
-From a34335f7058152218ba35a5c2af13780c1c6524f Mon Sep 17 00:00:00 2001
-From: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
-Date: Mon, 25 May 2026 14:01:46 +0200
-Subject: [PATCH 2/2] rename: set -> setFunction
-
----
- tests/TestBinnedStorage.cc | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/tests/TestBinnedStorage.cc b/tests/TestBinnedStorage.cc
-index b61a078a..9382f40f 100644
---- a/tests/TestBinnedStorage.cc
-+++ b/tests/TestBinnedStorage.cc
-@@ -71,7 +71,7 @@ auto adapterConstructors() {
-   return CHECK_TEST_RES(bin.counter == 1);
- }
- 
--auto set() {
-+auto setFunction() {
-   BinningT binning({"test1", "test2"}, {1., 2., 3., 4.}, {1, 2, 3, 4, 5});
- 
-   auto binStorage = FillableT<3, TestClass>(binning, [](...){});
-@@ -285,7 +285,7 @@ auto testBinnedStorage() {
-   return CHECK_TEST_RES(
-     (constructors()            == EXIT_SUCCESS) &&
-     (adapterConstructors()     == EXIT_SUCCESS) &&
--    (set()                     == EXIT_SUCCESS) &&
-+    (setFunction()                     == EXIT_SUCCESS) &&
-     (binsVectorWrapper()       == EXIT_SUCCESS) &&
-     (binSpaceCharacteristics() == EXIT_SUCCESS) &&
-     (arithmeticWrapper()       == EXIT_SUCCESS) &&
--- 
-GitLab
-
diff --git a/sci-physics/yoda/metadata.xml b/sci-physics/yoda/metadata.xml
deleted file mode 100644
index a50ed4254d55..000000000000
--- a/sci-physics/yoda/metadata.xml
+++ /dev/null
@@ -1,28 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://docs.baldeagleos.com/dtd/metadata.dtd">
-<pkgmetadata>
-  <maintainer type="person">
-    <email>apn-pucky@gentoo.org</email>
-    <name>Alexander Puck Neuwirth</name>
-  </maintainer>
-  <maintainer type="project">
-    <email>sci-physics@gentoo.org</email>
-    <name>Gentoo Physics Project</name>
-  </maintainer>
-  <longdescription>
-    Yet more Objects for Data Analysis is a small set of data analysis
-    (specifically histogramming) classes being developed by MCnet
-    members as a lightweight common system for MC event generator
-    validation analyses, particularly as the core histogramming system
-    in Rivet.
-  </longdescription>
-  <use>
-    <flag name="root">Adds support for <pkg>sci-physics/root</pkg>
-    </flag>
-    <flag name="highfive">Build with <pkg>sci-libs/highfive</pkg> and <pkg>sci-libs/hdf5</pkg>
-    </flag>
-    <flag name="eigen">Build with <pkg>dev-cpp/eigen</pkg>
-    </flag>
-  </use>
-  <origin>baldeagleos-repo</origin>
-</pkgmetadata>
diff --git a/sci-physics/yoda/yoda-1.9.10.ebuild b/sci-physics/yoda/yoda-1.9.10.ebuild
deleted file mode 100644
index 90a4b247f7d4..000000000000
--- a/sci-physics/yoda/yoda-1.9.10.ebuild
+++ /dev/null
@@ -1,112 +0,0 @@
-# Copyright 2022-2026 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{13..14} )
-
-inherit bash-completion-r1 autotools python-single-r1 optfeature
-
-DESCRIPTION="Yet more Objects for (High Energy Physics) Data Analysis"
-HOMEPAGE="https://yoda.hepforge.org/"
-
-if [[ ${PV} == 9999 ]]; then
-	inherit git-r3
-	EGIT_REPO_URI="https://gitlab.com/hepcedar/yoda"
-else
-	SRC_URI="https://yoda.hepforge.org/downloads?f=${P^^}.tar.bz2 -> ${P^^}.tar.bz2"
-	S="${WORKDIR}/${P^^}"
-	KEYWORDS="~amd64"
-fi
-
-LICENSE="GPL-3"
-SLOT="0/${PV}"
-IUSE="root test +python +zlib"
-RESTRICT="!test? ( test )"
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} ) root? ( python )"
-
-RDEPEND="
-	root? ( sci-physics/root:=[${PYTHON_SINGLE_USEDEP}] )
-	python? ( ${PYTHON_DEPS} )
-	zlib? ( virtual/zlib:= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="
-	python? (
-		$(python_gen_cond_dep '
-			>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
-		')
-		test? (
-			$(python_gen_cond_dep '
-				dev-python/numpy[${PYTHON_USEDEP}]
-				dev-python/matplotlib[${PYTHON_USEDEP}]
-			')
-		)
-	)
-"
-
-PATCHES=(
-	"${FILESDIR}"/${PN}-1.9.9-configure.patch
-)
-
-pkg_setup() {
-	use python && python-single-r1_pkg_setup
-}
-
-src_prepare() {
-	default
-	# reconf due to python3_10 patch
-	eautoreconf
-}
-
-src_configure() {
-	# we need to use the prefix cython here
-	econf --disable-static \
-		$(use_enable root) \
-		$(use_enable python pyext) \
-		$(use_with zlib zlib "${ESYSROOT}/usr") \
-		$(usex python CYTHON="${ESYSROOT}/usr/bin/cython")
-}
-
-src_test() {
-	# PYTESTS and SHTESTS both require python tools
-	if use python; then
-		emake check
-	else
-		emake check PYTESTS= SHTESTS= NO_PYTHON=1
-	fi
-}
-
-src_install() {
-	emake install DESTDIR="${ED}"
-
-	if use python ; then
-		newbashcomp "${ED}"/etc/bash_completion.d/${PN}-completion ${PN}
-		bashcomp_alias ${PN} ${PN}-config
-		bashcomp_alias ${PN} ${PN}stack \
-			aida2flat \
-			${PN}diff \
-			${PN}cnv \
-			${PN}hist \
-			${PN}-config \
-			${PN}2flat \
-			${PN}scale \
-			${PN}2root \
-			${PN}cmp \
-			${PN}merge \
-			${PN}plot \
-			aida2${PN} \
-			${PN}ls \
-			${PN}envelope \
-			${PN}2aida
-	fi
-
-	rm "${ED}"/etc/bash_completion.d/${PN}-completion || die
-
-	use python && python_optimize
-	find "${ED}" -name '*.la' -delete || die
-}
-
-pkg_postinst() {
-	optfeature "plotting support" virtual/latex-base dev-python/matplotlib
-}
diff --git a/sci-physics/yoda/yoda-2.1.2.ebuild b/sci-physics/yoda/yoda-2.1.2.ebuild
deleted file mode 100644
index 78267727f58d..000000000000
--- a/sci-physics/yoda/yoda-2.1.2.ebuild
+++ /dev/null
@@ -1,113 +0,0 @@
-# Copyright 2022-2026 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{13..14} )
-
-inherit bash-completion-r1 python-single-r1 optfeature autotools
-
-DESCRIPTION="Yet more Objects for (High Energy Physics) Data Analysis"
-HOMEPAGE="https://yoda.hepforge.org/"
-
-if [[ ${PV} == 9999 ]]; then
-	inherit git-r3
-	EGIT_REPO_URI="https://gitlab.com/hepcedar/yoda"
-	EGIT_BRANCH="main"
-else
-	SRC_URI="https://yoda.hepforge.org/downloads?f=${P^^}.tar.bz2 -> ${P^^}.tar.bz2"
-	S="${WORKDIR}/${P^^}"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-LICENSE="GPL-3"
-SLOT="0/${PV}"
-IUSE="test +highfive +python +zlib"
-RESTRICT="!test? ( test )"
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-
-RDEPEND="
-	dev-cpp/yaml-cpp
-	highfive? (
-		sci-libs/highfive
-		sci-libs/hdf5[cxx]
-	)
-	python? ( ${PYTHON_DEPS} )
-	zlib? ( virtual/zlib:= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="
-	python? (
-		$(python_gen_cond_dep '
-			>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
-		')
-		test? (
-			$(python_gen_cond_dep '
-				dev-python/numpy[${PYTHON_USEDEP}]
-				dev-python/matplotlib[${PYTHON_USEDEP}]
-			')
-		)
-	)
-"
-
-PATCHES=(
-	"${FILESDIR}"/${P}-testbinestimate.patch
-)
-
-pkg_setup() {
-	use python && python-single-r1_pkg_setup
-}
-
-src_prepare() {
-	default
-	# reconf due to 9999 version
-	eautoreconf
-}
-
-src_configure() {
-	# we need to use the prefix cython here
-	econf --disable-static \
-		--with-yaml-cpp="${EPREFIX}/usr" \
-		$(use_enable highfive h5) \
-		$(use_with highfive highfive "${ESYSROOT}/usr") \
-		$(use_enable python pyext) \
-		$(use_with zlib zlib "${ESYSROOT}/usr") \
-		$(usex python CYTHON="${ESYSROOT}/usr/bin/cython")
-}
-
-src_test() {
-	# PYTESTS and SHTESTS both require python tools
-	if use python; then
-		emake check
-	else
-		emake check PYTESTS= SHTESTS= NO_PYTHON=1
-	fi
-}
-
-src_install() {
-	default
-
-	if use python ; then
-		newbashcomp "${ED}"/etc/bash_completion.d/${PN}-completion ${PN}-config
-		bashcomp_alias ${PN}-config \
-			${PN}ls \
-			${PN}diff \
-			${PN}merge \
-			${PN}stack \
-			${PN}scale \
-			${PN}plot \
-			${PN}envelope \
-			${PN}cnv \
-			${PN}2root
-		rm "${ED}"/etc/bash_completion.d/${PN}-completion || die
-		python_optimize
-	fi
-
-	find "${ED}" -name '*.la' -delete || die
-}
-
-pkg_postinst() {
-	optfeature "root conversion" sci-physics/root
-	optfeature "latex plotting support" virtual/latex-base
-	optfeature "python plotting support" dev-python/matplotlib
-}
diff --git a/sci-physics/yoda/yoda-2.1.3.ebuild b/sci-physics/yoda/yoda-2.1.3.ebuild
deleted file mode 100644
index 9cabaf05bd01..000000000000
--- a/sci-physics/yoda/yoda-2.1.3.ebuild
+++ /dev/null
@@ -1,113 +0,0 @@
-# Copyright 2022-2026 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{13..14} )
-
-inherit bash-completion-r1 python-single-r1 optfeature autotools
-
-DESCRIPTION="Yet more Objects for (High Energy Physics) Data Analysis"
-HOMEPAGE="https://yoda.hepforge.org/"
-
-if [[ ${PV} == 9999 ]]; then
-	inherit git-r3
-	EGIT_REPO_URI="https://gitlab.com/hepcedar/yoda"
-	EGIT_BRANCH="main"
-else
-	SRC_URI="https://yoda.hepforge.org/downloads?f=${P^^}.tar.bz2 -> ${P^^}.tar.bz2"
-	S="${WORKDIR}/${P^^}"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-LICENSE="GPL-3"
-SLOT="0/${PV}"
-IUSE="test +highfive +python +zlib"
-RESTRICT="!test? ( test )"
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-
-RDEPEND="
-	dev-cpp/yaml-cpp
-	highfive? (
-		sci-libs/highfive
-		sci-libs/hdf5[cxx]
-	)
-	python? ( ${PYTHON_DEPS} )
-	zlib? ( virtual/zlib:= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="
-	python? (
-		$(python_gen_cond_dep '
-			>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
-		')
-		test? (
-			$(python_gen_cond_dep '
-				dev-python/numpy[${PYTHON_USEDEP}]
-				dev-python/matplotlib[${PYTHON_USEDEP}]
-			')
-		)
-	)
-"
-
-PATCHES=(
-	"${FILESDIR}"/${P}-stdvector.patch
-)
-
-pkg_setup() {
-	use python && python-single-r1_pkg_setup
-}
-
-src_prepare() {
-	default
-	# reconf due to 9999 version
-	eautoreconf
-}
-
-src_configure() {
-	# we need to use the prefix cython here
-	econf --disable-static \
-		--with-yaml-cpp="${EPREFIX}/usr" \
-		$(use_enable highfive h5) \
-		$(use_with highfive highfive "${ESYSROOT}/usr") \
-		$(use_enable python pyext) \
-		$(use_with zlib zlib "${ESYSROOT}/usr") \
-		$(usex python CYTHON="${ESYSROOT}/usr/bin/cython")
-}
-
-src_test() {
-	# PYTESTS and SHTESTS both require python tools
-	if use python; then
-		emake check
-	else
-		emake check PYTESTS= SHTESTS= NO_PYTHON=1
-	fi
-}
-
-src_install() {
-	default
-
-	if use python ; then
-		newbashcomp "${ED}"/etc/bash_completion.d/${PN}-completion ${PN}-config
-		bashcomp_alias ${PN}-config \
-			${PN}ls \
-			${PN}diff \
-			${PN}merge \
-			${PN}stack \
-			${PN}scale \
-			${PN}plot \
-			${PN}envelope \
-			${PN}cnv \
-			${PN}2root
-		rm "${ED}"/etc/bash_completion.d/${PN}-completion || die
-		python_optimize
-	fi
-
-	find "${ED}" -name '*.la' -delete || die
-}
-
-pkg_postinst() {
-	optfeature "root conversion" sci-physics/root
-	optfeature "latex plotting support" virtual/latex-base
-	optfeature "python plotting support" dev-python/matplotlib
-}
diff --git a/sci-physics/yoda/yoda-9999.ebuild b/sci-physics/yoda/yoda-9999.ebuild
deleted file mode 100644
index 25ca71b9e31a..000000000000
--- a/sci-physics/yoda/yoda-9999.ebuild
+++ /dev/null
@@ -1,111 +0,0 @@
-# Copyright 2022-2026 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{13..14} )
-
-inherit bash-completion-r1 python-single-r1 optfeature autotools
-
-DESCRIPTION="Yet more Objects for (High Energy Physics) Data Analysis"
-HOMEPAGE="https://yoda.hepforge.org/"
-
-if [[ ${PV} == 9999 ]]; then
-	inherit git-r3
-	EGIT_REPO_URI="https://gitlab.com/hepcedar/yoda"
-	EGIT_BRANCH="main"
-else
-	SRC_URI="https://yoda.hepforge.org/downloads?f=${P^^}.tar.bz2 -> ${P^^}.tar.bz2"
-	S="${WORKDIR}/${P^^}"
-	KEYWORDS="~amd64 ~x86"
-fi
-
-LICENSE="GPL-3"
-SLOT="0/${PV}"
-IUSE="test +eigen +highfive +python +zlib"
-RESTRICT="!test? ( test )"
-REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
-
-RDEPEND="
-	dev-cpp/yaml-cpp
-	eigen? ( dev-cpp/eigen:3= )
-	highfive? (
-		sci-libs/highfive
-		sci-libs/hdf5[cxx]
-	)
-	python? ( ${PYTHON_DEPS} )
-	zlib? ( virtual/zlib:= )
-"
-DEPEND="${RDEPEND}"
-BDEPEND="
-	python? (
-		$(python_gen_cond_dep '
-			>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
-		')
-		test? (
-			$(python_gen_cond_dep '
-				dev-python/numpy[${PYTHON_USEDEP}]
-				dev-python/matplotlib[${PYTHON_USEDEP}]
-			')
-		)
-	)
-"
-
-pkg_setup() {
-	use python && python-single-r1_pkg_setup
-}
-
-src_prepare() {
-	default
-	# reconf due to 9999 version
-	eautoreconf
-}
-
-src_configure() {
-	# we need to use the prefix cython here
-	econf --disable-static \
-		--with-yaml-cpp="${EPREFIX}/usr" \
-		$(use_with eigen eigen "${EPREFIX}/usr/include/eigen3") \
-		$(use_enable highfive h5) \
-		$(use_with highfive highfive "${ESYSROOT}/usr") \
-		$(use_enable python pyext) \
-		$(use_with zlib zlib "${ESYSROOT}/usr") \
-		$(usex python CYTHON="${ESYSROOT}/usr/bin/cython")
-}
-
-src_test() {
-	# PYTESTS and SHTESTS both require python tools
-	if use python; then
-		emake check
-	else
-		emake check PYTESTS= SHTESTS= NO_PYTHON=1
-	fi
-}
-
-src_install() {
-	default
-
-	if use python ; then
-		newbashcomp "${ED}"/etc/bash_completion.d/${PN}-completion ${PN}-config
-		bashcomp_alias ${PN}-config \
-			${PN}ls \
-			${PN}diff \
-			${PN}merge \
-			${PN}stack \
-			${PN}scale \
-			${PN}plot \
-			${PN}envelope \
-			${PN}cnv \
-			${PN}2root
-		rm "${ED}"/etc/bash_completion.d/${PN}-completion || die
-		python_optimize
-	fi
-
-	find "${ED}" -name '*.la' -delete || die
-}
-
-pkg_postinst() {
-	optfeature "root conversion" sci-physics/root
-	optfeature "latex plotting support" virtual/latex-base
-	optfeature "python plotting support" dev-python/matplotlib
-}