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authorroot <root@alpha.trunkmasters.com>2026-06-04 16:24:49 -0500
committerroot <root@alpha.trunkmasters.com>2026-06-04 16:24:49 -0500
commita3ceca1b4c0d9bdb550dc23f06ffbb5a8e033bc7 (patch)
tree0c52bbae1c242fbc296bd650fcd1167685f81492 /sci-biology/cytoscape-bin
parentbfd9c39e4712ebdb442d4ca0673061faed1e70e1 (diff)
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Adding metadata
Diffstat (limited to 'sci-biology/cytoscape-bin')
-rw-r--r--sci-biology/cytoscape-bin/Manifest1
-rw-r--r--sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild40
-rw-r--r--sci-biology/cytoscape-bin/metadata.xml17
3 files changed, 0 insertions, 58 deletions
diff --git a/sci-biology/cytoscape-bin/Manifest b/sci-biology/cytoscape-bin/Manifest
deleted file mode 100644
index 37d8d06695f0..000000000000
--- a/sci-biology/cytoscape-bin/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST cytoscape-unix-3.10.4.tar.gz 357480347 BLAKE2B 85f25e2a3950bd9c60721b354c0fe6b00aefc9239ec6073c1ae797677f584e9f36501a2b822a2c48e788e649955fa79384984d1cf9c79eb7189cd5124c23cd65 SHA512 36948acca38a465dedc0b2fc6063f1c1a9bdadc6d378970c21fd910ddcfc436ecc246ba685cb958b5d9f7b4505a96533da82783d91500d6fe788cbd01c958a4e
diff --git a/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild b/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild
deleted file mode 100644
index e259d4684eca..000000000000
--- a/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="8"
-
-inherit desktop java-pkg-2
-
-DESCRIPTION="A visualization platform for molecular interaction networks"
-HOMEPAGE="https://www.cytoscape.org/"
-SRC_URI="https://github.com/cytoscape/cytoscape/releases/download/${PV}/cytoscape-unix-${PV}.tar.gz"
-
-S="${WORKDIR}"
-
-LICENSE="LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-RDEPEND="virtual/jdk:17"
-
-src_install() {
- MY_PN="cytoscape"
- MYW="${WORKDIR}/${MY_PN}-unix-${PV}"
-
- insinto "/opt/${MY_PN}"
- doins -r ${MYW}/apps
- doins -r ${MYW}/framework
- doins -r ${MYW}/sampleData
-
- cd ${MYW}
- sh gen_vmoptions.sh
- doins Cytoscape.vmoptions
- exeinto "/opt/${MY_PN}"
- doexe "${MYW}/${MY_PN}.sh"
- dosym "${EPREFIX}/opt/${MY_PN}/${MY_PN}.sh" "${EPREFIX}/opt/bin/${MY_PN}"
-
- exeinto "/opt/${MY_PN}/framework/bin"
- doexe framework/bin/karaf
-
- newicon framework/cytoscape_logo_512.png cytoscape_logo.png
- make_desktop_entry ${MY_PN} CytoScape cytoscape_logo Science
-}
diff --git a/sci-biology/cytoscape-bin/metadata.xml b/sci-biology/cytoscape-bin/metadata.xml
deleted file mode 100644
index fd4219e20956..000000000000
--- a/sci-biology/cytoscape-bin/metadata.xml
+++ /dev/null
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>andres.becerra@gmail.com</email>
- <name>Andrés Becerra Sandoval</name>
- </maintainer>
- <upstream>
- <bugs-to>
- https://cytoscape.org/bug-report.html
- </bugs-to>
- <changelog>
- https://cytoscape.org/releasenotes.html
- </changelog>
- <remote-id type="github">cytoscape/cytoscape</remote-id>
- </upstream>
-</pkgmetadata>