diff options
| author | root <root@alpha.trunkmasters.com> | 2026-06-12 11:50:53 -0500 |
|---|---|---|
| committer | root <root@alpha.trunkmasters.com> | 2026-06-12 11:50:53 -0500 |
| commit | 290aebdea65a02557706eaeda477fef0437b6a48 (patch) | |
| tree | f87a939169a508a2e943570501b64cc16b411cda /sci-biology/biopython | |
| parent | 6783ddcd4b73d9ce586a71770caed352bec93b16 (diff) | |
| download | baldeagleos-repo-290aebdea65a02557706eaeda477fef0437b6a48.tar.gz baldeagleos-repo-290aebdea65a02557706eaeda477fef0437b6a48.tar.xz baldeagleos-repo-290aebdea65a02557706eaeda477fef0437b6a48.zip | |
Adding metadata
Diffstat (limited to 'sci-biology/biopython')
| -rw-r--r-- | sci-biology/biopython/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/biopython/biopython-1.87.ebuild | 54 | ||||
| -rw-r--r-- | sci-biology/biopython/metadata.xml | 9 |
3 files changed, 0 insertions, 64 deletions
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest deleted file mode 100644 index 958821fd58aa..000000000000 --- a/sci-biology/biopython/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST biopython-1.87.tar.gz 19855264 BLAKE2B 04e98210f5addcd2e18ef085fb054b322cdf4377c0fee51300a2581555967f03e46285dd2d3ecec63864e42fecf91d9c9b9b7763c9497e3413a817eb007845d3 SHA512 aed9131f85b28d1b6fb7b1878d6afe2b701eddae092514ec43c69b623c871e16dbf5aaed464709423031169c0c13709bfbc0055e4cdc89c766e4445b959ba7a5 diff --git a/sci-biology/biopython/biopython-1.87.ebuild b/sci-biology/biopython/biopython-1.87.ebuild deleted file mode 100644 index d7b0506361a6..000000000000 --- a/sci-biology/biopython/biopython-1.87.ebuild +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright 1999-2026 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{13..14} ) -DISTUTILS_USE_PEP517="setuptools" -DISTUTILS_EXT=1 - -inherit distutils-r1 optfeature pypi - -DESCRIPTION="Python modules for computational molecular biology" -HOMEPAGE="https://www.biopython.org/ https://pypi.org/project/biopython/" - -LICENSE="HPND" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -RDEPEND=" - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/rdflib[${PYTHON_USEDEP}] - dev-python/pygraphviz[${PYTHON_USEDEP}] - >=dev-python/reportlab-3.5.13-r1[${PYTHON_USEDEP}] - dev-python/pydot[${PYTHON_USEDEP}]" -DEPEND="${RDEPEND}" -BDEPEND="app-alternatives/lex" - -DOCS=( {CONTRIB,DEPRECATED,NEWS,README}.rst Doc/. ) - -python_test() { - cd Tests || die - "${EPYTHON}" run_tests.py --offline --verbose || die -} - -python_install_all() { - # remove files causing ecompressdir to fail - rm Doc/examples/ls_orchid.gbk.{gz,bz2} || die - - distutils-r1_python_install_all - - dodir /usr/share/${PN} - cp -r --preserve=mode Scripts Tests "${ED}"/usr/share/${PN} || die -} - -pkg_postinst() { - optfeature_header "For database support you need to install:" - optfeature "MySQL database support" dev-python/mysqlclient - optfeature "PostgreSQL database support" dev-python/psycopg:2 - - optfeature_header "Some applications need extra packages:" - optfeature "EMBOSS (The European Molecular Biology Open Software Suite)" sci-biology/emboss -} diff --git a/sci-biology/biopython/metadata.xml b/sci-biology/biopython/metadata.xml deleted file mode 100644 index eb019c4338fe..000000000000 --- a/sci-biology/biopython/metadata.xml +++ /dev/null @@ -1,9 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "https://docs.baldeagleos.com/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <origin>baldeagleos-repo</origin> -</pkgmetadata> |