Adding metadata

11 files changed, 280 insertions, 64 deletions

diff --git a/dev-python/charset_normalizer/Manifest b/dev-python/charset_normalizer/Manifest
index 53fbe23ae995..5b2a038dcfe2 100644
--- a/dev-python/charset_normalizer/Manifest
+++ b/dev-python/charset_normalizer/Manifest
@@ -1,3 +1,4 @@
 DIST charset_normalizer-2.0.10.gh.tar.gz 82368 BLAKE2B 935af7625c138f8751de60c4179ee6b0195e99366c7bbecd8e9dfdf09ea557e2eb7cb86830321f91b3b7aa3fc1b3cc376266a4c22d23aabc6dfa6b9db57beb45 SHA512 87c8cbadef8c57121f0f6e2ea9558a9d2124dc444789dd984beadae020349a4e48a484e8937399f0e99f8c87edc621d55d26a9f22fa738e468e70ed17564d7ae
 DIST charset_normalizer-2.0.11.gh.tar.gz 83221 BLAKE2B 3342c56b9e66c64e80ec8a29d9b416e8d11c0c57800f40dcbdb9105ae11c1e838682e178d46b2b604b29afa61aabf0b9c3f9db3063998542f03f1c379a64b7f8 SHA512 1026302a412263ce0fc1b2f3c1a32f27b060cdcabe49f4567a5641e4f58a5375813d5d668e96b37af1a982b2d2c6e437ae229706704196a211ba14dfdc7c9ea0
+DIST charset_normalizer-2.0.12.gh.tar.gz 83293 BLAKE2B f1e993fff311cd3a1081a68d545703f545d68712c18f3821368c144b6166a8790482711171254f2741117ecbc9e18ad0bd5c19165d5fa6aed24ba021ce08535d SHA512 c42c64a9e15b322da0dfb6afa19947683a31106fdd620c15c0d948593e95e21d0d9c4a94ace32d67a9cc0cd95aea8f40b8fd09807b214f4ae2e79164627da05d
 DIST charset_normalizer-2.0.9.gh.tar.gz 79757 BLAKE2B 9e4b3f65689791739f6b7509bcf9cce8f0a9c536251452b1130aa4476fa218c11087db719d8273087884a9e96b9daf32599d1386e95bda42ca31600b0b37299e SHA512 0957752c1083897193fbdfbeec453a2b279b0834c0074f9f1ae08faac51d3e281eeb0a6d8fb217885101fd04761296555364a9f957e89bf8103fdc569d249056
diff --git a/dev-python/charset_normalizer/charset_normalizer-2.0.12.ebuild b/dev-python/charset_normalizer/charset_normalizer-2.0.12.ebuild
new file mode 100644
index 000000000000..6768172e1eab
--- /dev/null
+++ b/dev-python/charset_normalizer/charset_normalizer-2.0.12.ebuild
@@ -0,0 +1,34 @@
+# Copyright 2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+# please keep this ebuild at EAPI 7 -- sys-apps/portage dep
+EAPI=7
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{6,7,8,9,10} pypy3 )
+
+inherit distutils-r1
+
+DESCRIPTION="The Real First Universal Charset Detector"
+HOMEPAGE="
+	https://pypi.org/project/charset-normalizer/
+	https://github.com/Ousret/charset_normalizer/"
+SRC_URI="
+	https://github.com/Ousret/charset_normalizer/archive/${PV}.tar.gz
+		-> ${P}.gh.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86"
+
+distutils_enable_tests pytest
+
+src_prepare() {
+	sed -i -e '/addopts/d' setup.cfg || die
+	distutils-r1_src_prepare
+}
+
+python_test() {
+	# pytest-httpx interferes with logging tests
+	epytest -p no:httpx
+}
diff --git a/dev-python/intreehooks/Manifest b/dev-python/intreehooks/Manifest
deleted file mode 100644
index cde19e0d6481..000000000000
--- a/dev-python/intreehooks/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST intreehooks-1.0.tar.gz 2701 BLAKE2B 2c82bae05cf3fc3bde13e8dd2ffb9d1ef79edc6711b5038f6f9b3dddd863492be24a425bf848c9868ecf730f813243fb5fa50ebfad52b44341be18e72727f195 SHA512 5a020dd6bd7994eca5f476618f57e2d86567756fae74f6fa50b6fbc96accfe8db910f3175bafa3ce85f37b05edc05ca1042dcec78407a241cfaffc0a0e997f4e
diff --git a/dev-python/intreehooks/intreehooks-1.0.ebuild b/dev-python/intreehooks/intreehooks-1.0.ebuild
deleted file mode 100644
index e934b7bb6102..000000000000
--- a/dev-python/intreehooks/intreehooks-1.0.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 2019-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{6,7,8,9,10} pypy3 )
-inherit distutils-r1
-
-DESCRIPTION="Load a PEP 517 backend from inside the source tree"
-HOMEPAGE="
-	https://pypi.org/project/intreehooks/
-	https://github.com/takluyver/intreehooks/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="amd64 arm arm64 ppc ppc64 ~riscv sparc x86"
-IUSE="examples"
-
-RDEPEND="
-	dev-python/toml[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest
-
-python_prepare_all() {
-	# replace pytoml with toml
-	sed -e 's:pytoml:toml:' \
-		-i setup.py intreehooks.py || die
-
-	distutils-r1_python_prepare_all
-}
-
-python_install_all() {
-	local -a DOCS=( README.rst )
-	use examples && dodoc -r examples
-
-	distutils-r1_python_install_all
-}
diff --git a/dev-python/intreehooks/metadata.xml b/dev-python/intreehooks/metadata.xml
deleted file mode 100644
index 82f79c8ebfba..000000000000
--- a/dev-python/intreehooks/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://liguros.gitlab.io/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
-  <email>chutzpah@gentoo.org</email>
-  <name>Patrick McLean</name>
- </maintainer>
- <maintainer type="project">
-  <email>python@gentoo.org</email>
-  <name>Python</name>
- </maintainer>
- <upstream>
-  <remote-id type="pypi">intreehooks</remote-id>
- </upstream>
- <origin>gentoo-staging</origin>
-</pkgmetadata>
\ No newline at end of file
diff --git a/dev-python/kaitaistruct/metadata.xml b/dev-python/kaitaistruct/metadata.xml
index 433fe5028a20..e77779ad059e 100644
--- a/dev-python/kaitaistruct/metadata.xml
+++ b/dev-python/kaitaistruct/metadata.xml
@@ -2,12 +2,8 @@
 <!DOCTYPE pkgmetadata SYSTEM "https://liguros.gitlab.io/dtd/metadata.dtd">
 <pkgmetadata>
  <maintainer type="person">
-  <email>matt@offtopica.uk</email>
-  <name>Matt Smith</name>
- </maintainer>
- <maintainer type="project">
-  <email>proxy-maint@gentoo.org</email>
-  <name>Proxy Maintainers</name>
+  <email>matthew@gentoo.org</email>
+  <name>Matthew Smith</name>
  </maintainer>
  <longdescription lang="en">
 		Kaitai Struct is a declarative language used for
diff --git a/dev-python/pandas/Manifest b/dev-python/pandas/Manifest
index f9d0d2479f80..02dc11a49026 100644
--- a/dev-python/pandas/Manifest
+++ b/dev-python/pandas/Manifest
@@ -2,3 +2,4 @@ DIST pandas-1.3.3.tar.gz 4730758 BLAKE2B 0ef945b2181329265b93fbdb7f9c35497ef8475
 DIST pandas-1.3.4.tar.gz 4734599 BLAKE2B a71b5b57198defcf4f6d848f445c7112668994f089b62a6bce1028ab4ba8a9bf3adc3c393699332fb0c76818ed80164843114e68e57232c495cee03ec5e88009 SHA512 c821365b1f06d69c61b957c4768a5f86b39d97d74b0732ea0eaade9d21bca8f652e38f91f83adf2fc6488f227c75d4e5e64e8f131456e7f0a93ecfcf237190a6
 DIST pandas-1.3.5.tar.gz 4736591 BLAKE2B 7c7de1485028d7c610c5a23ca1cc98551b24e824b609b7a624469f2471bb8d3984a25db48ab7413aa7cdd0057c5c5c9f1eb2b59cfc5cbf6d30177e12e2acc7b3 SHA512 cf3f76894cae19784af6393d4a575d114b55621a3d594edd7e95ac6d5c8588a580135789c859c618acfeceeb710d2a1fdd94188a839a90be6b58af929e00a726
 DIST pandas-1.4.0.tar.gz 4935046 BLAKE2B f579abe78812d9c155c2d08708f6b46ac7363d351a750cc5b2017aa641f5307ae0baa7de57866dbefe74790133d2219d6742cb6f015f8a360365cf30345a0b44 SHA512 800909c4e80ab50391e22bf67ccd78532730e200bc58ffc32d4a6b9e37522a90e2ed486a02f67a4df1e28fa531c075e0caadc2c8a06b8a06c7f2ef466a371489
+DIST pandas-1.4.1.tar.gz 4941369 BLAKE2B ce85253b32c3be6baad74e2bca98d24b43f42c311ffad128615b711e461a76067035e238cf1693eed12d4ca8e354aef56f711e45cd934a4af6222f4727838b1e SHA512 2d8ba8f3152b5bd5495e406ce21d896342ef77473ed3c0207f77b6503c3f4353bbeb5ec573696eb6748e65e956d9d1b97d314a136104151ecb5ba822afa72422
diff --git a/dev-python/pandas/pandas-1.4.1.ebuild b/dev-python/pandas/pandas-1.4.1.ebuild
new file mode 100644
index 000000000000..7e909d9be13f
--- /dev/null
+++ b/dev-python/pandas/pandas-1.4.1.ebuild
@@ -0,0 +1,192 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{6,7,8,9,10} )
+PYTHON_REQ_USE="threads(+)"
+
+VIRTUALX_REQUIRED="manual"
+
+inherit distutils-r1 multiprocessing optfeature virtualx
+
+DESCRIPTION="Powerful data structures for data analysis and statistics"
+HOMEPAGE="https://pandas.pydata.org/ https://github.com/pandas-dev/pandas/"
+SRC_URI="
+	https://github.com/pandas-dev/pandas/releases/download/v${PV}/${P}.tar.gz"
+S="${WORKDIR}/${P/_/}"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86"
+IUSE="doc full-support minimal test X"
+RESTRICT="!test? ( test )"
+
+RECOMMENDED_DEPEND="
+	>=dev-python/bottleneck-1.2.1[${PYTHON_USEDEP}]
+	>=dev-python/numexpr-2.7.0[${PYTHON_USEDEP}]
+"
+
+# TODO: add pandas-gbq to the tree
+OPTIONAL_DEPEND="
+	dev-python/beautifulsoup4[${PYTHON_USEDEP}]
+	dev-python/blosc[${PYTHON_USEDEP}]
+	|| (
+		dev-python/html5lib[${PYTHON_USEDEP}]
+		dev-python/lxml[${PYTHON_USEDEP}]
+	)
+	dev-python/jinja[${PYTHON_USEDEP}]
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	|| (
+		dev-python/openpyxl[${PYTHON_USEDEP}]
+		dev-python/xlsxwriter[${PYTHON_USEDEP}]
+	)
+	>=dev-python/pytables-3.2.1[${PYTHON_USEDEP}]
+	>=dev-python/xarray-0.12.3[${PYTHON_USEDEP}]
+	>=dev-python/sqlalchemy-1.3.0[${PYTHON_USEDEP}]
+	>=dev-python/xlrd-1.2.0[${PYTHON_USEDEP}]
+	>=dev-python/xlwt-1.3.0[${PYTHON_USEDEP}]
+	!hppa? (
+		dev-python/statsmodels[${PYTHON_USEDEP}]
+		>=dev-python/scipy-1.1[${PYTHON_USEDEP}]
+	)
+	X? (
+		|| (
+			dev-python/PyQt5[${PYTHON_USEDEP}]
+			x11-misc/xclip
+			x11-misc/xsel
+		)
+	)
+"
+COMMON_DEPEND="
+	>=dev-python/numpy-1.21.0[${PYTHON_USEDEP}]
+	>=dev-python/python-dateutil-2.8.1-r3[${PYTHON_USEDEP}]
+	>=dev-python/pytz-2020.1[${PYTHON_USEDEP}]
+"
+DEPEND="${COMMON_DEPEND}
+	>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
+	doc? (
+		${VIRTUALX_DEPEND}
+		app-text/pandoc
+		dev-python/beautifulsoup4[${PYTHON_USEDEP}]
+		dev-python/html5lib[${PYTHON_USEDEP}]
+		dev-python/ipython[${PYTHON_USEDEP}]
+		dev-python/lxml[${PYTHON_USEDEP}]
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/nbsphinx[${PYTHON_USEDEP}]
+		>=dev-python/numpydoc-0.9.1[${PYTHON_USEDEP}]
+		>=dev-python/openpyxl-1.6.1[${PYTHON_USEDEP}]
+		>=dev-python/pytables-3.0.0[${PYTHON_USEDEP}]
+		dev-python/pytz[${PYTHON_USEDEP}]
+		dev-python/rpy[${PYTHON_USEDEP}]
+		dev-python/sphinx[${PYTHON_USEDEP}]
+		dev-python/xlrd[${PYTHON_USEDEP}]
+		dev-python/xlwt[${PYTHON_USEDEP}]
+		dev-python/scipy[${PYTHON_USEDEP}]
+		x11-misc/xclip
+	)
+	test? (
+		${VIRTUALX_DEPEND}
+		${RECOMMENDED_DEPEND}
+		${OPTIONAL_DEPEND}
+		dev-python/beautifulsoup4[${PYTHON_USEDEP}]
+		>=dev-python/hypothesis-5.5.3[${PYTHON_USEDEP}]
+		dev-python/openpyxl[${PYTHON_USEDEP}]
+		dev-python/pymysql[${PYTHON_USEDEP}]
+		>=dev-python/pytest-6[${PYTHON_USEDEP}]
+		>=dev-python/pytest-xdist-1.31[${PYTHON_USEDEP}]
+		dev-python/psycopg:2[${PYTHON_USEDEP}]
+		dev-python/xlsxwriter[${PYTHON_USEDEP}]
+		x11-misc/xclip
+		x11-misc/xsel
+	)
+"
+# dev-python/statsmodels invokes a circular dep
+#  hence rm from doc? ( ), again
+RDEPEND="${COMMON_DEPEND}
+	!minimal? ( ${RECOMMENDED_DEPEND} )
+	full-support? ( ${OPTIONAL_DEPEND} )
+"
+
+python_prepare_all() {
+	local PATCHES=(
+		# https://github.com/pandas-dev/pandas/issues/44980
+		"${FILESDIR}"/pandas-1.4.0-distutils-hack-assertion.patch
+	)
+
+	# Prevent un-needed download during build
+	sed -e "/^              'sphinx.ext.intersphinx',/d" \
+		-i doc/source/conf.py || die
+
+	# requires package installed
+	sed -e '/extra_compile_args =/s:"-Werror"::' \
+		-i setup.py || die
+
+	distutils-r1_python_prepare_all
+}
+
+python_compile() {
+	distutils-r1_python_compile -j1
+}
+
+python_compile_all() {
+	# To build docs the need be located in $BUILD_DIR,
+	# else PYTHONPATH points to unusable modules.
+	if use doc; then
+		cd "${BUILD_DIR}"/lib || die
+		cp -ar "${S}"/doc . && cd doc || die
+		LANG=C PYTHONPATH=. virtx ${EPYTHON} make.py html
+	fi
+}
+
+src_test() {
+	virtx distutils-r1_src_test
+}
+
+python_test() {
+	local EPYTEST_DESELECT=(
+		# test for rounding errors, fails if we have better precision
+		# e.g. on amd64 with FMA or on arm64
+		# https://github.com/pandas-dev/pandas/issues/38921
+		pandas/tests/window/test_rolling.py::test_rolling_var_numerical_issues
+
+		# TODO
+		pandas/tests/api/test_api.py::TestTesting::test_util_testing_deprecated
+		pandas/tests/api/test_api.py::TestTesting::test_util_testing_deprecated_direct
+	)
+
+	local -x LC_ALL=C.UTF-8
+	cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
+	"${EPYTHON}" -c "import pandas; pandas.show_versions()" || die
+	epytest pandas --skip-slow --skip-network -m "not single" \
+		-n "$(makeopts_jobs "${MAKEOPTS}" "$(get_nproc)")" ||
+		die "Tests failed with ${EPYTHON}"
+}
+
+python_install_all() {
+	if use doc; then
+		dodoc -r "${BUILD_DIR}"/lib/doc/build/html
+		einfo "An initial build of docs is absent of references to statsmodels"
+		einfo "due to circular dependency. To have them included, emerge"
+		einfo "statsmodels next and re-emerge pandas with USE doc"
+	fi
+
+	distutils-r1_python_install_all
+}
+
+pkg_postinst() {
+	optfeature "accelerating certain types of NaN evaluations, using specialized cython routines to achieve large speedups." dev-python/bottleneck
+	optfeature "accelerating certain numerical operations, using multiple cores as well as smart chunking and caching to achieve large speedups" ">=dev-python/numexpr-2.1"
+	optfeature "needed for pandas.io.html.read_html" dev-python/beautifulsoup4 dev-python/html5lib dev-python/lxml
+	optfeature "for msgpack compression using blosc" dev-python/blosc
+	optfeature "Template engine for conditional HTML formatting" dev-python/jinja
+	optfeature "Plotting support" dev-python/matplotlib
+	optfeature "Needed for Excel I/O" ">=dev-python/openpyxl-3.0.0" dev-python/xlsxwriter dev-python/xlrd dev-python/xlwt
+	optfeature "necessary for HDF5-based storage" ">=dev-python/pytables-3.2.1"
+	optfeature "R I/O support" dev-python/rpy
+	optfeature "Needed for parts of pandas.stats" dev-python/statsmodels
+	optfeature "SQL database support" ">=dev-python/sqlalchemy-1.3.0"
+	optfeature "miscellaneous statistical functions" dev-python/scipy
+	optfeature "necessary to use pandas.io.clipboard.read_clipboard support" dev-python/PyQt5 dev-python/pygtk x11-misc/xclip x11-misc/xsel
+}
diff --git a/dev-python/pytest-qt/pytest-qt-4.0.2.ebuild b/dev-python/pytest-qt/pytest-qt-4.0.2.ebuild
index bcdf6aa1888a..d2a0c584d468 100644
--- a/dev-python/pytest-qt/pytest-qt-4.0.2.ebuild
+++ b/dev-python/pytest-qt/pytest-qt-4.0.2.ebuild
@@ -50,10 +50,10 @@ src_test() {
 
 python_test() {
 	distutils_install_for_testing
-	PYTEST_QT_API="pyqt5" epytest
+	PYTEST_QT_API="pyqt5" epytest || die
 	if [[ "${EPYTHON}" == "python3.10" ]]; then
 		return
 	else
-		PYTEST_QT_API="pyside2" epytest
+		PYTEST_QT_API="pyside2" epytest || die
 	fi
 }
diff --git a/dev-python/ruamel-yaml/Manifest b/dev-python/ruamel-yaml/Manifest
index f96cee2d5296..d3546736a7f0 100644
--- a/dev-python/ruamel-yaml/Manifest
+++ b/dev-python/ruamel-yaml/Manifest
@@ -1 +1,2 @@
 DIST ruamel.yaml-0.17.20.tar.xz 184628 BLAKE2B 0b50240717c10d6dd5aefed9e092fddf503f079066ed49d1f614928046544a67b9168c76a58ee5fbe782fe6e1296a6282416fa8567783f4543ef9c8c0ad340ca SHA512 8c2614ffecba1560e829cfc27f9b4effec589f9eba90792c470ba8f531fecd06ae6f12036ee5463f89021360fb4f35e9b78a16fc778507e88c5c6a8f6e293876
+DIST ruamel.yaml-0.17.21.tar.xz 184612 BLAKE2B cc7e2a336d3c77a9f2d7e5d7233ceb4d15fddca3a97ec0e54427469fd24c7c63fc70b258adbad92a816d99a1f9839d41eccb9f3224e7a23884914755fa424bc9 SHA512 87f4723bfc76b1b21168852aabe4b49921f175294ac05b4e3f292f2bcf23fe6595df3e066843d193f881b274be2a7b358bd04625afef913bb0e5811efe98b761
diff --git a/dev-python/ruamel-yaml/ruamel-yaml-0.17.21.ebuild b/dev-python/ruamel-yaml/ruamel-yaml-0.17.21.ebuild
new file mode 100644
index 000000000000..d4d2a0976b46
--- /dev/null
+++ b/dev-python/ruamel-yaml/ruamel-yaml-0.17.21.ebuild
@@ -0,0 +1,47 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{6,7,8,9,10} pypy3 )
+inherit distutils-r1
+
+MY_P="${P/-/.}"
+DESCRIPTION="YAML parser/emitter that supports roundtrip comment preservation"
+HOMEPAGE="
+	https://pypi.org/project/ruamel.yaml/
+	https://sourceforge.net/p/ruamel-yaml/"
+# PyPI tarballs do not include tests
+SRC_URI="mirror://sourceforge/ruamel-dl-tagged-releases/${MY_P}.tar.xz"
+S="${WORKDIR}"/${MY_P}
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86"
+
+RDEPEND="
+	dev-python/namespace-ruamel[${PYTHON_USEDEP}]
+	dev-python/ruamel-yaml-clib[${PYTHON_USEDEP}]"
+BDEPEND="
+	test? (
+		dev-python/ruamel-std-pathlib[${PYTHON_USEDEP}]
+	)"
+
+distutils_enable_tests pytest
+
+# Old PyYAML tests from lib/ require special set-up and are invoked indirectly
+# via test_z_olddata, tell pytest itself to leave the subdir alone.
+python_test() {
+	[[ ${EPYTHON} == pypy3 ]] && local EPYTEST_DESELECT=(
+		_test/test_deprecation.py::test_collections_deprecation
+	)
+	local EPYTEST_IGNORE=(
+		_test/lib/
+	)
+	epytest
+}
+
+python_install() {
+	distutils-r1_python_install --single-version-externally-managed
+	find "${ED}" -name '*.pth' -delete || die
+}