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authorLiguros - Gitlab CI/CD [develop] <gitlab@liguros.net>2025-12-19 09:54:18 +0000
committerLiguros - Gitlab CI/CD [develop] <gitlab@liguros.net>2025-12-19 09:54:18 +0000
commit4ae32df4bc23de9faff8697bf5253bd11d6b5bf5 (patch)
tree1df959fa44f06cf8bff7c49e69ab8776a697ebaa /dev-python/scikit-image
parent667aa2b0ba3c7ea09152f756f0369da6c969955e (diff)
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Adding metadata
Diffstat (limited to 'dev-python/scikit-image')
-rw-r--r--dev-python/scikit-image/Manifest2
-rw-r--r--dev-python/scikit-image/scikit-image-0.26.0_rc2.ebuild100
2 files changed, 102 insertions, 0 deletions
diff --git a/dev-python/scikit-image/Manifest b/dev-python/scikit-image/Manifest
index a04e426d0388..4105bf02d3f4 100644
--- a/dev-python/scikit-image/Manifest
+++ b/dev-python/scikit-image/Manifest
@@ -3,3 +3,5 @@ DIST scikit-image-data-5c090b56df3988d988ff97928e2ef2d2cbe38e1b.tar.bz2 15672329
DIST scikit_image-0.25.2.tar.gz 22693594 BLAKE2B 238b44c120c53c10d98fc79c9ccb81770297a16156ba2d4d52cfa4731252aa205698caac384b8569c4b52ed2eb0e61500facff00c238a3212ecd7ba9b86db3da SHA512 8977585f7695d10df52d243d9fafdba2e04b5f4d4fe698dd9353bdffc4de21ad61053f55a46ed6350d5de8f1cd7dab969d45b85613a0e5fdb0b28a84c72551a9
DIST scikit_image-0.26.0rc1.tar.gz 22730546 BLAKE2B 63ef735b0cf49aec86d2f6c0953346f3087a750defd73541497a387d8ebb4cc70a5d8c316081e6fb8bdc2841bbda616064c6031cff512e9d3e63db066fa9ebd4 SHA512 d9e473ebf75b8c627dcfc9e92827e627703cdc5e3e2cde88c1cfce37c5b543dfd143622e1b1af7d1093bf1644d2e16c71c28ccd7a0af4b888186be35470dfee0
DIST scikit_image-0.26.0rc1.tar.gz.provenance 9858 BLAKE2B 50c4ba11c523add5a91c082ff57bbe12369b3c46133df1c6f5b859cfae9f7edae26ca3ee6f0e9ef96e242bce3f6b15738fc4d0ae0f9f98c157043b8daba258c9 SHA512 90d651546f2577d0e0e0692b48e04326aab0a5c32ac78ee68002fad8bc4d5fb14423d4f5bd5a3c9dcf359132856e5842fc6eeb3955db3ad2c5a62a1edaa52cbf
+DIST scikit_image-0.26.0rc2.tar.gz 22730972 BLAKE2B 8bda6ce9039a80a51f6376014f24cce34a4b25c128ea86d45db50247a761dee25a82036ec2eadb4efb4a6a3f12622c4498707b382da5879f81c68fa6b29e7732 SHA512 f1cae6d85517629d4421a0e6dda7a574e2e809dd2f7a9ccffe5ae5db34e217fe6102569c5f6bdaa67bdb520a0656223d0f7d94c52c05d339a149736959bd6caa
+DIST scikit_image-0.26.0rc2.tar.gz.provenance 9764 BLAKE2B 916a6b0872ae4da778f32f7f697bb7a919920ef3dd5f85036a550d17f6f9b65f7809a70b8e4d47401d6add7a293e66b237b879214befa7e8ac19c67f5879b059 SHA512 68ceafa5b3f08d1a3523d2388c5e26c5af0ecc5278825cdf47719ac0bf159a1a7f730b6ec074f6ea5e749556acdde5fcaa8918897f8267814aaa3cc34f38e62e
diff --git a/dev-python/scikit-image/scikit-image-0.26.0_rc2.ebuild b/dev-python/scikit-image/scikit-image-0.26.0_rc2.ebuild
new file mode 100644
index 000000000000..7b68dd6defe6
--- /dev/null
+++ b/dev-python/scikit-image/scikit-image-0.26.0_rc2.ebuild
@@ -0,0 +1,100 @@
+# Copyright 1999-2025 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=meson-python
+DISTUTILS_EXT=1
+PYPI_VERIFY_REPO=https://github.com/scikit-image/scikit-image
+PYTHON_COMPAT=( python3_{10..14} )
+
+inherit distutils-r1 optfeature pypi
+
+# the package refers to blobs directly, use the newest commit to get
+# them all
+TEST_DATA_COMMIT=5c090b56df3988d988ff97928e2ef2d2cbe38e1b
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="
+ https://scikit-image.org/
+ https://github.com/scikit-image/scikit-image/
+ https://pypi.org/project/scikit-image/
+"
+SRC_URI+="
+ test? (
+ https://gitlab.com/scikit-image/data/-/archive/${TEST_DATA_COMMIT}/scikit-image-data-${TEST_DATA_COMMIT}.tar.bz2
+ )
+"
+
+LICENSE="BSD"
+SLOT="0"
+
+RDEPEND="
+ >=dev-python/imageio-2.36[${PYTHON_USEDEP}]
+ >=dev-python/lazy-loader-0.4[${PYTHON_USEDEP}]
+ >=dev-python/networkx-3.0[${PYTHON_USEDEP}]
+ >=dev-python/numpy-1.24[${PYTHON_USEDEP}]
+ >=dev-python/pillow-10.1[${PYTHON_USEDEP}]
+ >=dev-python/scipy-1.11.4[sparse(+),${PYTHON_USEDEP}]
+ >=dev-python/tifffile-2022.8.12[${PYTHON_USEDEP}]
+"
+DEPEND="
+ ${RDEPEND}
+ dev-python/pythran[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ >=dev-python/cython-3.0.4[${PYTHON_USEDEP}]
+ dev-python/packaging[${PYTHON_USEDEP}]
+ dev-python/pythran[${PYTHON_USEDEP}]
+"
+
+# xdist does not work with this test suite
+EPYTEST_PLUGINS=( pytest-localserver )
+distutils_enable_tests pytest
+# There is a programmable error in your configuration file:
+#distutils_enable_sphinx doc/source dev-python/numpydoc dev-python/myst-parser
+
+src_test() {
+ # just useless formatter replacement
+ rm tests/conftest.py || die
+
+ # for some reason, upstream refetches data that's already in the tarball
+ # sigh
+ mkdir -p "${HOME}/.cache/scikit-image" || die
+ mv src/skimage "${HOME}/.cache/scikit-image/${PV/_/}" || die
+
+ # This is a true horror, sigh
+ local cache_dir=${HOME}/.cache/scikit-image/${PV/_/}/data
+ pushd "${WORKDIR}/data-${TEST_DATA_COMMIT}" >/dev/null || die
+ cp Tests_besides_Equalize_Otsu/add18_entropy/rank_filters_tests_3d.npz \
+ Tests_besides_Equalize_Otsu/gray_morph_output.npz \
+ brain.tiff cells3d.tif eagle.png \
+ "${cache_dir}/" || die
+ cp Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG "${cache_dir}"/skin.jpg || die
+ cp pivchallenge/B/B001_1.tif "${cache_dir}"/pivchallenge-B-B001_1.tif || die
+ cp pivchallenge/B/B001_2.tif "${cache_dir}"/pivchallenge-B-B001_2.tif || die
+ cp kidney-tissue-fluorescence.tif "${cache_dir}"/kidney.tif || die
+ cp lily-of-the-valley-fluorescence.tif "${cache_dir}"/lily.tif || die
+ cp astronaut_rl.npy "${cache_dir}/../restoration/" || die
+ popd > /dev/null || die
+
+ distutils-r1_src_test
+}
+
+python_test() {
+ local EPYTEST_DESELECT=(
+ # tests for downloading all data files, including these not needed
+ # by any actual tests
+ tests/skimage/data/test_data.py::test_download_all_with_pooch
+ )
+
+ epytest
+}
+
+pkg_postinst() {
+ optfeature "FITS io capability" dev-python/astropy
+ optfeature "GTK" dev-python/pygtk
+ optfeature "io plugin providing most standard formats" dev-python/imread
+ optfeature "plotting" dev-python/matplotlib
+ optfeature "wavelet transformations" dev-python/pywavelets
+ optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+}