From a3ceca1b4c0d9bdb550dc23f06ffbb5a8e033bc7 Mon Sep 17 00:00:00 2001 From: root Date: Thu, 4 Jun 2026 16:24:49 -0500 Subject: Adding metadata --- dev-python/scipy/Manifest | 4 - dev-python/scipy/metadata.xml | 25 ----- dev-python/scipy/scipy-1.16.3.ebuild | 191 ----------------------------------- dev-python/scipy/scipy-1.17.0.ebuild | 181 --------------------------------- dev-python/scipy/scipy-1.17.1.ebuild | 181 --------------------------------- 5 files changed, 582 deletions(-) delete mode 100644 dev-python/scipy/Manifest delete mode 100644 dev-python/scipy/metadata.xml delete mode 100644 dev-python/scipy/scipy-1.16.3.ebuild delete mode 100644 dev-python/scipy/scipy-1.17.0.ebuild delete mode 100644 dev-python/scipy/scipy-1.17.1.ebuild (limited to 'dev-python/scipy') diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest deleted file mode 100644 index 048cf3dcb968..000000000000 --- a/dev-python/scipy/Manifest +++ /dev/null @@ -1,4 +0,0 @@ -DIST scipy-1.16.3.tar.gz 30597883 BLAKE2B ba026013ecfdc9329ec6140bf32f8de61e141b645c5a35ad5dc38276ac4df296fce0091675177daaf3d65f2cb797783365df306397e1643d50508e343daaa325 SHA512 7386670d2be598f46425a5f2ac0194748c83ec006be0b0395a850a613bc12731669469aefe503c9db2521aba956325d44e7a75fa82e4c1e629202cafd1966aa5 -DIST scipy-1.17.0.tar.gz 30396830 BLAKE2B c1e26583f26b969eca6c6559a0a8cc02da857dd0e02ebc871f5c3cde8e6feadd845b802ca6b2386d7de6bfbff724b97fcdd396679bd037b5d15f69b492a4043f SHA512 299339cf7885ae6ad81bb29ab1a9128c1e7baef387e64e03a5ca784c14f08de1fe58c8d58b25c76c9068b09d8d97fc8b38d2e03922f0f8ada4e5d00910d56dae -DIST scipy-1.17.1.tar.gz 30573822 BLAKE2B 2e01e534131819f542630a6664ef1cae971e4ec1566d9caca8cc77a1d8c0915574c8094e8f1efe84f1ecf016ca868f6b26283cf5eff6eb576242857c993f0cc4 SHA512 c2930d9be072057eb25394d6bee7fbe504f1b7c442b5393641ab3ff6bba590d4a76d240eb3a2ef58891bcb449af847de056a8957c591caa8fbf496ce9ce5a9e5 -DIST scipy-html-1.16.2.zip 71516578 BLAKE2B 244537f823e39b52e0b00df63f8f36088f5ef17e365f98415d1573883e9c0eee3f4376b149eaea9b70b34b34a294aeafae9f849050ab8161a8ecdb24172c2876 SHA512 15df0c7211cc4d32007b54015efc17edd1c9b23e8892b748ab946c5c1ea3e1840a00d9005b585cc0c6416bcef1e490f54ff919d3c0140ed95d8e469836751d5c diff --git a/dev-python/scipy/metadata.xml b/dev-python/scipy/metadata.xml deleted file mode 100644 index 65faa04f1fe2..000000000000 --- a/dev-python/scipy/metadata.xml +++ /dev/null @@ -1,25 +0,0 @@ - - - - - sci@gentoo.org - Gentoo Science Project - - - python@gentoo.org - Python - - - SciPy is an open source library of scientific tools for Python. SciPy - supplements the popular numpy module, gathering a variety of high level - science and engineering modules together as a single package. - SciPy includes modules for graphics and plotting, optimization, - integration, special functions, signal and image processing, genetic - algorithms, ODE solvers, and others. - - - scipy/scipy - scipy - scipy - - diff --git a/dev-python/scipy/scipy-1.16.3.ebuild b/dev-python/scipy/scipy-1.16.3.ebuild deleted file mode 100644 index 5dea711a4448..000000000000 --- a/dev-python/scipy/scipy-1.16.3.ebuild +++ /dev/null @@ -1,191 +0,0 @@ -# Copyright 1999-2026 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -FORTRAN_NEEDED=fortran -DISTUTILS_EXT=1 -DISTUTILS_USE_PEP517=meson-python -PYTHON_COMPAT=( python3_{13..14} ) -PYTHON_REQ_USE="threads(+)" - -inherit flag-o-matic fortran-2 distutils-r1 - -DESCRIPTION="Scientific algorithms library for Python" -HOMEPAGE=" - https://scipy.org/ - https://github.com/scipy/scipy/ - https://pypi.org/project/scipy/ -" - -if [[ ${PV} == *9999* ]] ; then - inherit git-r3 - - # Need submodules, so git for now. - EGIT_REPO_URI="https://github.com/scipy/scipy" - EGIT_BRANCH="maintenance/$(ver_cut 1-2).x" - EGIT_SUBMODULES=( '*' ) -else - inherit pypi - - # Upstream is often behind with doc updates - DOC_PV=1.16.2 - - SRC_URI+=" - doc? ( - https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip - ) - " - - if [[ ${PV} != *rc* ]] ; then - KEYWORDS="amd64 arm arm64 ~loong ~ppc ppc64 ~riscv ~s390 ~sparc x86" - fi -fi - -LICENSE="BSD LGPL-2" -SLOT="0" -IUSE="doc +fortran test-rust" - -# pythran is needed in both BDEPEND (for /usr/bin/pythran) and in DEPEND -# to actually compile code generated by pythran (headers and such needed). -# -# umfpack is technically optional but it's preferred to have it available. -COMMON_DEPEND=" - >=dev-python/numpy-1.23.5:=[lapack,${PYTHON_USEDEP}] - >=media-libs/qhull-2020.2:= - virtual/cblas - >=virtual/lapack-3.8 -" -# Only boost.math is used, and meson.build doesn't even look up specific boost modules. -DEPEND=" - ${COMMON_DEPEND} - >=dev-libs/boost-1.88.0 -" -RDEPEND=" - ${COMMON_DEPEND} - dev-python/pillow[${PYTHON_USEDEP}] -" -DEPEND+=" - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) -" -BDEPEND=" - dev-lang/swig - >=dev-python/cython-3.0.8[${PYTHON_USEDEP}] - >=dev-python/meson-python-0.15.0[${PYTHON_USEDEP}] - >=dev-python/pybind11-2.13.2[${PYTHON_USEDEP}] - >=dev-python/pytest-8.0.0[${PYTHON_USEDEP}] - >=dev-build/meson-1.5.0 - !kernel_Darwin? ( dev-util/patchelf ) - virtual/pkgconfig - doc? ( app-arch/unzip ) - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) - test-rust? ( - dev-python/pooch[${PYTHON_USEDEP}] - ) -" - -EPYTEST_PLUGINS=( hypothesis ) -EPYTEST_XDIST=1 -distutils_enable_tests pytest - -src_unpack() { - default - - if use doc; then - unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die - fi -} - -src_prepare() { - distutils-r1_src_prepare - - # unpin system dependencies - sed -i -e "s@version : '@&>=@" meson.build || die -} - -python_configure_all() { - DISTUTILS_ARGS=( - -Dblas=blas - -Dlapack=lapack - -Duse-pythran=$(usex fortran true false) - -Duse-system-libraries=all - ) - - # https://bugs.gentoo.org/932721 - has_version '>=dev-python/numpy-2.0.0' && filter-lto -} - -python_test() { - # We run tests in parallel, so avoid having n^2 threads in lapack - # tests. - local -x BLIS_NUM_THREADS=1 - local -x MKL_NUM_THREADS=1 - local -x OMP_NUM_THREADS=1 - local -x OPENBLAS_NUM_THREADS=1 - - cd "${BUILD_DIR}/install$(python_get_sitedir)" || die - - local EPYTEST_DESELECT=( - # Network - scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all - scipy/datasets/tests/test_data.py::TestDatasets::test_ascent - scipy/datasets/tests/test_data.py::TestDatasets::test_face - scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram - - # Crashes with assertion, not a regression - # https://github.com/scipy/scipy/issues/19321 - scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object - - # Awfully slow tests - scipy/interpolate/tests/test_bsplines.py::TestBatch::test_batch - scipy/linalg/tests/test_basic.py::TestLstsq::test_random_complex_exact - scipy/sparse/linalg/_eigen/tests/test_svds.py::test_small_sigma_sparse - - # TODO: minor precision errors - 'scipy/linalg/tests/test_batch.py::TestBatch::test_solve[float32-bdim2]' - 'scipy/linalg/tests/test_batch.py::TestBatch::test_lu_solve[float32-bdim2]' - 'scipy/stats/tests/test_continuous.py::TestDistributions::test_funcs[cdf-methods11-x-Normal][' - - # Crashes, probably too big - 'scipy/interpolate/tests/test_fitpack2.py::TestRectBivariateSpline::test_spline_large_2d_maxit' - ) - local EPYTEST_IGNORE=() - - if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then - EPYTEST_IGNORE+=( - scipy/datasets/tests/test_data.py - ) - fi - - if has_version -b "sys-libs/zlib-ng[compat]"; then - EPYTEST_DESELECT+=( - # https://github.com/scipy/scipy/issues/23185 - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_bad_checksum - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_overlap - ) - fi - - case ${EPYTHON} in - pypy3*) - EPYTEST_DESELECT+=( - # TODO - scipy/special/tests/test_data.py::test_boost - scipy/_lib/tests/test_ccallback.py::test_callbacks - ) - ;; - esac - - # avoid other stuff being multithreaded when using xdist - local -x PYTHON_CPU_COUNT=1 - epytest scipy -} - -python_install_all() { - use doc && local HTML_DOCS=( "${WORKDIR}"/html/. ) - - distutils-r1_python_install_all -} diff --git a/dev-python/scipy/scipy-1.17.0.ebuild b/dev-python/scipy/scipy-1.17.0.ebuild deleted file mode 100644 index 63e1678458e9..000000000000 --- a/dev-python/scipy/scipy-1.17.0.ebuild +++ /dev/null @@ -1,181 +0,0 @@ -# Copyright 1999-2026 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -FORTRAN_NEEDED=fortran -DISTUTILS_EXT=1 -DISTUTILS_USE_PEP517=meson-python -PYTHON_COMPAT=( python3_{13..14} ) -PYTHON_REQ_USE="threads(+)" - -inherit flag-o-matic fortran-2 distutils-r1 - -DESCRIPTION="Scientific algorithms library for Python" -HOMEPAGE=" - https://scipy.org/ - https://github.com/scipy/scipy/ - https://pypi.org/project/scipy/ -" - -if [[ ${PV} == *9999* ]] ; then - inherit git-r3 - - # Need submodules, so git for now. - EGIT_REPO_URI="https://github.com/scipy/scipy" - EGIT_BRANCH="maintenance/$(ver_cut 1-2).x" - EGIT_SUBMODULES=( '*' ) -else - inherit pypi - - # Upstream is often behind with doc updates - DOC_PV=1.16.2 - - SRC_URI+=" - doc? ( - https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip - ) - " - - if [[ ${PV} != *rc* ]]; then - KEYWORDS="~amd64 ~arm ~arm64 ~loong ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86" - fi -fi - -LICENSE="BSD LGPL-2" -SLOT="0" -IUSE="doc +fortran test-rust" - -# pythran is needed in both BDEPEND (for /usr/bin/pythran) and in DEPEND -# to actually compile code generated by pythran (headers and such needed). -# -# umfpack is technically optional but it's preferred to have it available. -COMMON_DEPEND=" - >=dev-python/numpy-1.23.5:=[lapack,${PYTHON_USEDEP}] - >=media-libs/qhull-2020.2:= - virtual/cblas - >=virtual/lapack-3.8 -" -# Only boost.math is used, and meson.build doesn't even look up specific boost modules. -DEPEND=" - ${COMMON_DEPEND} - >=dev-libs/boost-1.89.0 -" -RDEPEND=" - ${COMMON_DEPEND} - dev-python/pillow[${PYTHON_USEDEP}] -" -DEPEND+=" - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) -" -BDEPEND=" - dev-lang/swig - >=dev-python/cython-3.0.8[${PYTHON_USEDEP}] - >=dev-python/meson-python-0.15.0[${PYTHON_USEDEP}] - >=dev-python/pybind11-2.13.2[${PYTHON_USEDEP}] - >=dev-python/pytest-8.0.0[${PYTHON_USEDEP}] - >=dev-build/meson-1.5.0 - !kernel_Darwin? ( dev-util/patchelf ) - virtual/pkgconfig - doc? ( app-arch/unzip ) - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) - test-rust? ( - dev-python/pooch[${PYTHON_USEDEP}] - ) -" - -EPYTEST_PLUGINS=( hypothesis ) -EPYTEST_XDIST=1 -distutils_enable_tests pytest - -src_unpack() { - default - - if use doc; then - unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die - fi -} - -src_prepare() { - distutils-r1_src_prepare - - # unpin system dependencies - sed -i -e "s@version : '@&>=@" meson.build || die -} - -python_configure_all() { - DISTUTILS_ARGS=( - -Dblas=blas - -Dlapack=lapack - -Duse-pythran=$(usex fortran true false) - -Duse-system-libraries=all - ) - - # https://bugs.gentoo.org/932721 - has_version '>=dev-python/numpy-2.0.0' && filter-lto -} - -python_test() { - # We run tests in parallel, so avoid having n^2 threads in lapack - # tests. - local -x BLIS_NUM_THREADS=1 - local -x MKL_NUM_THREADS=1 - local -x OMP_NUM_THREADS=1 - local -x OPENBLAS_NUM_THREADS=1 - - cd "${BUILD_DIR}/install$(python_get_sitedir)" || die - - local EPYTEST_DESELECT=( - # Network - scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all - scipy/datasets/tests/test_data.py::TestDatasets::test_ascent - scipy/datasets/tests/test_data.py::TestDatasets::test_face - scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram - - # Crashes with assertion, not a regression - # https://github.com/scipy/scipy/issues/19321 - scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object - - # Awfully slow tests - scipy/interpolate/tests/test_bsplines.py::TestBatch::test_batch - scipy/linalg/tests/test_basic.py::TestLstsq::test_random_complex_exact - scipy/sparse/linalg/_eigen/tests/test_svds.py::test_small_sigma_sparse - - # TODO: minor precision errors - 'scipy/linalg/tests/test_batch.py::TestBatch::test_solve[float32-bdim2]' - 'scipy/linalg/tests/test_batch.py::TestBatch::test_lu_solve[float32-bdim2]' - 'scipy/stats/tests/test_continuous.py::TestDistributions::test_funcs[cdf-methods11-x-Normal][' - - # Crashes, probably too big - 'scipy/interpolate/tests/test_fitpack2.py::TestRectBivariateSpline::test_spline_large_2d_maxit' - ) - local EPYTEST_IGNORE=() - - if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then - EPYTEST_IGNORE+=( - scipy/datasets/tests/test_data.py - ) - fi - - if has_version -b "sys-libs/zlib-ng[compat]"; then - EPYTEST_DESELECT+=( - # https://github.com/scipy/scipy/issues/23185 - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_bad_checksum - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_overlap - ) - fi - - # avoid other stuff being multithreaded when using xdist - local -x PYTHON_CPU_COUNT=1 - epytest scipy -} - -python_install_all() { - use doc && local HTML_DOCS=( "${WORKDIR}"/html/. ) - - distutils-r1_python_install_all -} diff --git a/dev-python/scipy/scipy-1.17.1.ebuild b/dev-python/scipy/scipy-1.17.1.ebuild deleted file mode 100644 index 16065f748084..000000000000 --- a/dev-python/scipy/scipy-1.17.1.ebuild +++ /dev/null @@ -1,181 +0,0 @@ -# Copyright 1999-2026 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -FORTRAN_NEEDED=fortran -DISTUTILS_EXT=1 -DISTUTILS_USE_PEP517=meson-python -PYTHON_COMPAT=( python3_{13..14} ) -PYTHON_REQ_USE="threads(+)" - -inherit flag-o-matic fortran-2 distutils-r1 - -DESCRIPTION="Scientific algorithms library for Python" -HOMEPAGE=" - https://scipy.org/ - https://github.com/scipy/scipy/ - https://pypi.org/project/scipy/ -" - -if [[ ${PV} == *9999* ]] ; then - inherit git-r3 - - # Need submodules, so git for now. - EGIT_REPO_URI="https://github.com/scipy/scipy" - EGIT_BRANCH="maintenance/$(ver_cut 1-2).x" - EGIT_SUBMODULES=( '*' ) -else - inherit pypi - - # Upstream is often behind with doc updates - DOC_PV=1.16.2 - - SRC_URI+=" - doc? ( - https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip - ) - " - - if [[ ${PV} != *rc* ]]; then - KEYWORDS="amd64 ~arm arm64 ~loong ~ppc ppc64 ~riscv ~s390 ~sparc ~x86" - fi -fi - -LICENSE="BSD LGPL-2" -SLOT="0" -IUSE="doc +fortran test-rust" - -# pythran is needed in both BDEPEND (for /usr/bin/pythran) and in DEPEND -# to actually compile code generated by pythran (headers and such needed). -# -# umfpack is technically optional but it's preferred to have it available. -COMMON_DEPEND=" - >=dev-python/numpy-1.23.5:=[lapack,${PYTHON_USEDEP}] - >=media-libs/qhull-2020.2:= - virtual/cblas - >=virtual/lapack-3.8 -" -# Only boost.math is used, and meson.build doesn't even look up specific boost modules. -DEPEND=" - ${COMMON_DEPEND} - >=dev-libs/boost-1.89.0 -" -RDEPEND=" - ${COMMON_DEPEND} - dev-python/pillow[${PYTHON_USEDEP}] -" -DEPEND+=" - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) -" -BDEPEND=" - dev-lang/swig - >=dev-python/cython-3.0.8[${PYTHON_USEDEP}] - >=dev-python/meson-python-0.15.0[${PYTHON_USEDEP}] - >=dev-python/pybind11-2.13.2[${PYTHON_USEDEP}] - >=dev-python/pytest-8.0.0[${PYTHON_USEDEP}] - >=dev-build/meson-1.5.0 - !kernel_Darwin? ( dev-util/patchelf ) - virtual/pkgconfig - doc? ( app-arch/unzip ) - fortran? ( - >=dev-python/pythran-0.16.0[${PYTHON_USEDEP}] - ) - test-rust? ( - dev-python/pooch[${PYTHON_USEDEP}] - ) -" - -EPYTEST_PLUGINS=( hypothesis ) -EPYTEST_XDIST=1 -distutils_enable_tests pytest - -src_unpack() { - default - - if use doc; then - unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die - fi -} - -src_prepare() { - distutils-r1_src_prepare - - # unpin system dependencies - sed -i -e "s@version : '@&>=@" meson.build || die -} - -python_configure_all() { - DISTUTILS_ARGS=( - -Dblas=blas - -Dlapack=lapack - -Duse-pythran=$(usex fortran true false) - -Duse-system-libraries=all - ) - - # https://bugs.gentoo.org/932721 - has_version '>=dev-python/numpy-2.0.0' && filter-lto -} - -python_test() { - # We run tests in parallel, so avoid having n^2 threads in lapack - # tests. - local -x BLIS_NUM_THREADS=1 - local -x MKL_NUM_THREADS=1 - local -x OMP_NUM_THREADS=1 - local -x OPENBLAS_NUM_THREADS=1 - - cd "${BUILD_DIR}/install$(python_get_sitedir)" || die - - local EPYTEST_DESELECT=( - # Network - scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all - scipy/datasets/tests/test_data.py::TestDatasets::test_ascent - scipy/datasets/tests/test_data.py::TestDatasets::test_face - scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram - - # Crashes with assertion, not a regression - # https://github.com/scipy/scipy/issues/19321 - scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object - - # Awfully slow tests - scipy/interpolate/tests/test_bsplines.py::TestBatch::test_batch - scipy/linalg/tests/test_basic.py::TestLstsq::test_random_complex_exact - scipy/sparse/linalg/_eigen/tests/test_svds.py::test_small_sigma_sparse - - # TODO: minor precision errors - 'scipy/linalg/tests/test_batch.py::TestBatch::test_solve[float32-bdim2]' - 'scipy/linalg/tests/test_batch.py::TestBatch::test_lu_solve[float32-bdim2]' - 'scipy/stats/tests/test_continuous.py::TestDistributions::test_funcs[cdf-methods11-x-Normal][' - - # Crashes, probably too big - 'scipy/interpolate/tests/test_fitpack2.py::TestRectBivariateSpline::test_spline_large_2d_maxit' - ) - local EPYTEST_IGNORE=() - - if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then - EPYTEST_IGNORE+=( - scipy/datasets/tests/test_data.py - ) - fi - - if has_version -b "sys-libs/zlib-ng[compat]"; then - EPYTEST_DESELECT+=( - # https://github.com/scipy/scipy/issues/23185 - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_bad_checksum - scipy/io/matlab/tests/test_streams.py::TestZlibInputStream::test_all_data_read_overlap - ) - fi - - # avoid other stuff being multithreaded when using xdist - local -x PYTHON_CPU_COUNT=1 - epytest scipy -} - -python_install_all() { - use doc && local HTML_DOCS=( "${WORKDIR}"/html/. ) - - distutils-r1_python_install_all -} -- cgit v1.3