From a6525dcd45145f787b550ce00d18d7396bcb54ac Mon Sep 17 00:00:00 2001 From: "Liguros - Gitlab CI/CD [develop]" Date: Fri, 7 Jan 2022 01:40:08 +0000 Subject: Adding metadata --- .../files/numpy-1.22.0-no-hardcode-blasv2.patch | 40 +---- dev-python/numpy/numpy-1.22.0-r1.ebuild | 162 +++++++++++++++++++++ dev-python/numpy/numpy-1.22.0.ebuild | 162 --------------------- 3 files changed, 168 insertions(+), 196 deletions(-) create mode 100644 dev-python/numpy/numpy-1.22.0-r1.ebuild delete mode 100644 dev-python/numpy/numpy-1.22.0.ebuild (limited to 'dev-python/numpy') diff --git a/dev-python/numpy/files/numpy-1.22.0-no-hardcode-blasv2.patch b/dev-python/numpy/files/numpy-1.22.0-no-hardcode-blasv2.patch index 7c9d7768607f..d87a16a4b6c9 100644 --- a/dev-python/numpy/files/numpy-1.22.0-no-hardcode-blasv2.patch +++ b/dev-python/numpy/files/numpy-1.22.0-no-hardcode-blasv2.patch @@ -2,12 +2,9 @@ Originally added in: https://gitweb.gentoo.org/repo/gentoo.git/commit/dev-python https://bugs.gentoo.org/567938 --- a/numpy/distutils/system_info.py +++ b/numpy/distutils/system_info.py -@@ -502,36 +502,7 @@ def get_info(name, notfound_action=0): - 2 - raise error - """ - cl = {'armpl': armpl_info, -- 'blas_armpl': blas_armpl_info, -- 'lapack_armpl': lapack_armpl_info, +@@ -505,33 +505,7 @@ def get_info(name, notfound_action=0): + 'blas_armpl': blas_armpl_info, + 'lapack_armpl': lapack_armpl_info, 'fftw3_armpl': fftw3_armpl_info, - 'atlas': atlas_info, # use lapack_opt or blas_opt instead - 'atlas_threads': atlas_threads_info, # ditto @@ -31,7 +28,7 @@ https://bugs.gentoo.org/567938 - 'blis': blis_info, # use blas_opt instead - 'lapack_mkl': lapack_mkl_info, # use lapack_opt instead - 'blas_mkl': blas_mkl_info, # use blas_opt instead -- 'accelerate': accelerate_info, # use blas_opt instead + 'accelerate': accelerate_info, # use blas_opt instead - 'openblas64_': openblas64__info, - 'openblas64__lapack': openblas64__lapack_info, - 'openblas_ilp64': openblas_ilp64_info, @@ -39,32 +36,7 @@ https://bugs.gentoo.org/567938 'x11': x11_info, 'fft_opt': fft_opt_info, 'fftw': fftw_info, -@@ -543,24 +514,12 @@ def get_info(name, notfound_action=0): - 'dfftw_threads': dfftw_threads_info, - 'sfftw_threads': sfftw_threads_info, - 'djbfft': djbfft_info, -- 'blas': blas_info, # use blas_opt instead -- 'lapack': lapack_info, # use lapack_opt instead -- 'lapack_src': lapack_src_info, -- 'blas_src': blas_src_info, - 'numpy': numpy_info, - 'f2py': f2py_info, - 'Numeric': Numeric_info, - 'numeric': Numeric_info, - 'numarray': numarray_info, - 'numerix': numerix_info, -- 'lapack_opt': lapack_opt_info, -- 'lapack_ilp64_opt': lapack_ilp64_opt_info, -- 'lapack_ilp64_plain_opt': lapack_ilp64_plain_opt_info, -- 'lapack64__opt': lapack64__opt_info, -- 'blas_opt': blas_opt_info, -- 'blas_ilp64_opt': blas_ilp64_opt_info, -- 'blas_ilp64_plain_opt': blas_ilp64_plain_opt_info, -- 'blas64__opt': blas64__opt_info, - 'boost_python': boost_python_info, - 'agg2': agg2_info, - 'wx': wx_info, -@@ -951,10 +910,7 @@ class system_info: +@@ -951,10 +925,7 @@ class system_info: return [b for b in [a.strip() for a in libs.split(',')] if b] def get_libraries(self, key='libraries'): @@ -72,7 +44,7 @@ https://bugs.gentoo.org/567938 - return self.get_libs(key, default=self._lib_names) - else: - return self.get_libs(key, '') -+ return self.get_libs(key, '') ++ return self.get_libs(key, '') def library_extensions(self): c = customized_ccompiler() diff --git a/dev-python/numpy/numpy-1.22.0-r1.ebuild b/dev-python/numpy/numpy-1.22.0-r1.ebuild new file mode 100644 index 000000000000..48005f2990c8 --- /dev/null +++ b/dev-python/numpy/numpy-1.22.0-r1.ebuild @@ -0,0 +1,162 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{6,7,8,9,10} ) +PYTHON_REQ_USE="threads(+)" + +FORTRAN_NEEDED=lapack + +inherit distutils-r1 flag-o-matic fortran-2 toolchain-funcs + +# Not ready yet +#DOC_PV=${PV} +DOC_PV=1.21.0 +DESCRIPTION="Fast array and numerical python library" +HOMEPAGE="https://numpy.org/" +SRC_URI=" + mirror://pypi/${PN:0:1}/${PN}/${P}.zip + doc? ( + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf + https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf + )" +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris" +IUSE="doc lapack" + +RDEPEND=" + lapack? ( + >=virtual/cblas-3.8 + >=virtual/lapack-3.8 + ) +" +BDEPEND=" + ${RDEPEND} + app-arch/unzip + >=dev-python/cython-0.29.24[${PYTHON_USEDEP}] + lapack? ( virtual/pkgconfig ) + test? ( + >=dev-python/hypothesis-5.8.0[${PYTHON_USEDEP}] + >=dev-python/pytz-2019.3[${PYTHON_USEDEP}] + >=dev-python/cffi-1.14.0[${PYTHON_USEDEP}] + ) +" + +PATCHES=( + "${FILESDIR}"/${PN}-1.22.0-no-hardcode-blasv2.patch +) + +distutils_enable_tests pytest + +src_unpack() { + default + if use doc; then + unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die + fi +} + +python_prepare_all() { + if use lapack; then + local incdir="${EPREFIX}"/usr/include + local libdir="${EPREFIX}"/usr/$(get_libdir) + cat >> site.cfg <<-EOF || die + [blas] + include_dirs = ${incdir} + library_dirs = ${libdir} + blas_libs = cblas,blas + [lapack] + library_dirs = ${libdir} + lapack_libs = lapack + EOF + else + export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None + fi + + export CC="$(tc-getCC) ${CFLAGS}" + + append-flags -fno-strict-aliasing + + # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 + # with the subtle difference that we don't want to break Darwin where + # -shared is not a valid linker argument + if [[ ${CHOST} != *-darwin* ]]; then + append-ldflags -shared + fi + + # only one fortran to link with: + # linking with cblas and lapack library will force + # autodetecting and linking to all available fortran compilers + append-fflags -fPIC + if use lapack; then + NUMPY_FCONFIG="config_fc --noopt --noarch" + # workaround bug 335908 + [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" + fi + + # don't version f2py, we will handle it. + sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die + + # disable fuzzed tests + find numpy/*/tests -name '*.py' -exec sed -i \ + -e 's:def \(.*_fuzz\):def _\1:' {} + || die + # very memory- and disk-hungry + sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die + + distutils-r1_python_prepare_all +} + +python_compile() { + export MAKEOPTS=-j1 #660754 + + distutils-r1_python_compile ${NUMPY_FCONFIG} +} + +python_test() { + local deselect=( + numpy/typing/tests/test_typing.py::test_reveal[arrayterator.py] + ) + + if use arm && [[ $(uname -m || echo "unknown") == "armv8l" ]] ; then + # Degenerate case. arm32 chroot on arm64. + # bug #774108 + deselect+=( + numpy/core/tests/test_cpu_features.py::Test_ARM_Features::test_features + ) + fi + + if use x86 ; then + deselect+=( + # https://github.com/numpy/numpy/issues/18388 + numpy/core/tests/test_umath.py::TestRemainder::test_float_remainder_overflow + # https://github.com/numpy/numpy/issues/18387 + numpy/random/tests/test_generator_mt19937.py::TestRandomDist::test_pareto + ) + fi + + distutils_install_for_testing --single-version-externally-managed \ + --record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG} + + cd "${TEST_DIR}/lib" || die + epytest ${deselect[@]/#/--deselect } +} + +python_install() { + # https://github.com/numpy/numpy/issues/16005 + local mydistutilsargs=( build_src ) + distutils-r1_python_install ${NUMPY_FCONFIG} + python_optimize +} + +python_install_all() { + local DOCS=( LICENSE.txt README.md THANKS.txt ) + + if use doc; then + local HTML_DOCS=( "${WORKDIR}"/html/. ) + DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf ) + fi + + distutils-r1_python_install_all +} diff --git a/dev-python/numpy/numpy-1.22.0.ebuild b/dev-python/numpy/numpy-1.22.0.ebuild deleted file mode 100644 index 1d48338e5320..000000000000 --- a/dev-python/numpy/numpy-1.22.0.ebuild +++ /dev/null @@ -1,162 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{6,7,8,9,10} ) -PYTHON_REQ_USE="threads(+)" - -FORTRAN_NEEDED=lapack - -inherit distutils-r1 flag-o-matic fortran-2 toolchain-funcs - -# Not ready yet -#DOC_PV=${PV} -DOC_PV=1.21.0 -DESCRIPTION="Fast array and numerical python library" -HOMEPAGE="https://numpy.org/" -SRC_URI=" - mirror://pypi/${PN:0:1}/${PN}/${P}.zip - doc? ( - https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip - https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf - https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf - )" -LICENSE="BSD" -SLOT="0" -KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris" -IUSE="doc lapack" - -RDEPEND=" - lapack? ( - >=virtual/cblas-3.8 - >=virtual/lapack-3.8 - ) -" -BDEPEND=" - ${RDEPEND} - app-arch/unzip - >=dev-python/cython-0.29.24[${PYTHON_USEDEP}] - lapack? ( virtual/pkgconfig ) - test? ( - >=dev-python/hypothesis-5.8.0[${PYTHON_USEDEP}] - >=dev-python/pytz-2019.3[${PYTHON_USEDEP}] - >=dev-python/cffi-1.14.0[${PYTHON_USEDEP}] - ) -" - -PATCHES=( - "${FILESDIR}"/${PN}-1.22.0-no-hardcode-blasv2.patch -) - -distutils_enable_tests pytest - -src_unpack() { - default - if use doc; then - unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die - fi -} - -python_prepare_all() { - if use lapack; then - local incdir="${EPREFIX}"/usr/include - local libdir="${EPREFIX}"/usr/$(get_libdir) - cat >> site.cfg <<-EOF || die - [blas] - include_dirs = ${incdir} - library_dirs = ${libdir} - blas_libs = cblas,blas - [lapack] - library_dirs = ${libdir} - lapack_libs = lapack - EOF - else - export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None - fi - - export CC="$(tc-getCC) ${CFLAGS}" - - append-flags -fno-strict-aliasing - - # See progress in http://projects.scipy.org/scipy/numpy/ticket/573 - # with the subtle difference that we don't want to break Darwin where - # -shared is not a valid linker argument - if [[ ${CHOST} != *-darwin* ]]; then - append-ldflags -shared - fi - - # only one fortran to link with: - # linking with cblas and lapack library will force - # autodetecting and linking to all available fortran compilers - append-fflags -fPIC - if use lapack; then - NUMPY_FCONFIG="config_fc --noopt --noarch" - # workaround bug 335908 - [[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95" - fi - - # don't version f2py, we will handle it. - sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die - - # disable fuzzed tests - find numpy/*/tests -name '*.py' -exec sed -i \ - -e 's:def \(.*_fuzz\):def _\1:' {} + || die - # very memory- and disk-hungry - sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die - - distutils-r1_python_prepare_all -} - -python_compile() { - export MAKEOPTS=-j1 #660754 - - distutils-r1_python_compile ${NUMPY_FCONFIG} -} - -python_test() { - local deselect=( - numpy/typing/tests/test_typing.py::test_reveal[arrayterator.py] - ) - - if use arm && [[ $(uname -m || echo "unknown") == "armv8l" ]] ; then - # Degenerate case. arm32 chroot on arm64. - # bug #774108 - deselect+=( - numpy/core/tests/test_cpu_features.py::Test_ARM_Features::test_features - ) - fi - - if use x86 ; then - deselect+=( - # https://github.com/numpy/numpy/issues/18388 - numpy/core/tests/test_umath.py::TestRemainder::test_float_remainder_overflow - # https://github.com/numpy/numpy/issues/18387 - numpy/random/tests/test_generator_mt19937.py::TestRandomDist::test_pareto - ) - fi - - distutils_install_for_testing --single-version-externally-managed \ - --record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG} - - cd "${TEST_DIR}/lib" || die - epytest ${deselect[@]/#/--deselect } -} - -python_install() { - # https://github.com/numpy/numpy/issues/16005 - local mydistutilsargs=( build_src ) - distutils-r1_python_install ${NUMPY_FCONFIG} - python_optimize -} - -python_install_all() { - local DOCS=( LICENSE.txt README.md THANKS.txt ) - - if use doc; then - local HTML_DOCS=( "${WORKDIR}"/html/. ) - DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf ) - fi - - distutils-r1_python_install_all -} -- cgit v1.3.1